Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2991 ATGGGTGAAGCAAAGCGTGGTGATTGCCCTCCAAAGAATGTGTCTTCCGATGGTGCTGCAGTTCCACCGTCCGATGTTCCCGCCAAGAAGCTCGCCAGACAGCTCGATTTCACTGGATTTGGCGGGATGCACGGCGTCGCGCCTTTGCCGGAGCACTCGCAGCAGGTGGTGGCGCAGGGTCAGCAACAGTTGTTGCAGTCGCAGCCACGGCCACACACACTCACGCAGCCGCCGGTGGTTTTGATGCCGGTGCCGCTTCCGACGCAGGCACCACACCCTTCAGTGAGGGTTGGGAAAGCAGAATCTCCAAAATCAAGGTCAAGGCCCAACTTTGAAATGAAAGAAGCTACTCCAAAGAAGCAGAAGCAGTGCAATTGTAAACACTCAAAGTGCTTAAAACTATATTGTGAATGTTTTGCGTCGGGAATATATTGTGATGGTTGCAATTGTGTAAATTGTCATAACAATGTTGAAAATGAAGCTGCTAGACGAGAAGCTGTTGAAGCTACTTTAGAACGTAACCCAAATGCATTTAGGCCGAAAATTGCGAGCAGCCCTCATGGACCACGTGACAGCAGGGAGGAGGCTGGGGAAGTTTTATTATTGGGAAAGCACAACAAGGGCTGCCATTGTAAAAAATCTGGGTGCCTCAAGAAGTACTGTGAGTGCTTCCAAGCCAACATTCTTTGTTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAGGGAAGTGAAGAGAGACAGGCTTTGTTCCATGGAGATCAAAATAACAACATGGCATATATTCAGCAGGCTGCAAATGCTGCAATAACTGGAGCTGTTGGTTCCTCTGGTTATTCATCACCACCCGTATCAAAGAAAAGAAAAGGCCAGGAACTCATCTTTGGGCCAACAGCCAAGGATCCATCTGTTGGCAGGCTTGGACAACAGGCAAACCATGTCAGAGGCCCTGCACCCTCCTCATCTTTGCTATCTGTCCCAGGTGCTCGTGTTGGAACTGCAACATTAGGTCCTTCAAAATTAATGTACAGGTCTCTATTGGCAGACATAATTCAACCACAGCACTTGAAGGAGCTTTGTTCAGTTCTGGTGCTAGTATCAGGACAAGCCGCAATGACACTAACAGACCAGAACAATTTAATAGATAAGCCTACAGAAGATCAGACCGAAACATCCCTTGCTTCTTCAACTCAAGAGCAATTACCAAGCCAAAACGGAGCTGATGTTGAGAAAGCTACAGCTGATGATTGTTCAAGTGCAAACCAAACAGATAATTCTGGTTCAGATGGTGCTGATGTCCTGAAAGGGAGGCCAATGTCTCCTGGAACTTTAGCATTAATGTGTGATGAGCAAGATACAATGTTCATGACTGCTGCCTCCCCTACTGGGTCAATTGCCCATGCTTGCAACACATCTTCTCAGTTGCACTATGGACAAGAAATGACAGAGGTCGATGCAGAGCAAGAAAGGATTGTTTTGACGAAGTTTAGAGATTTTCTTAATGGGGTTATCACTATGGGAGAAATTAACGAAACCAAGTGTTCTTCATTAGCCAGAAGTGATTTAGAGAGTCAAAAGGACCCAATCATCAATGGCGCTGGAAATGCCAGTACGGATACAGCACGTCAGGGAGCCACTAGGAATGGTGTTGCCAAAGCTGTTGTTCATCCCATGGCAACAAGTATGAGTGTGACTACTTCGATGTCTTTGGTTCATAGTAATCTTGTTCCTGAAAATGGGGAAACTAAGCTGAAGGTAAAAAATGAGACATGA 1776 0.4617 MGEAKRGDCPPKNVSSDGAAVPPSDVPAKKLARQLDFTGFGGMHGVAPLPEHSQQVVAQGQQQLLQSQPRPHTLTQPPVVLMPVPLPTQAPHPSVRVGKAESPKSRSRPNFEMKEATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCHNNVENEAARREAVEATLERNPNAFRPKIASSPHGPRDSREEAGEVLLLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMAYIQQAANAAITGAVGSSGYSSPPVSKKRKGQELIFGPTAKDPSVGRLGQQANHVRGPAPSSSLLSVPGARVGTATLGPSKLMYRSLLADIIQPQHLKELCSVLVLVSGQAAMTLTDQNNLIDKPTEDQTETSLASSTQEQLPSQNGADVEKATADDCSSANQTDNSGSDGADVLKGRPMSPGTLALMCDEQDTMFMTAASPTGSIAHACNTSSQLHYGQEMTEVDAEQERIVLTKFRDFLNGVITMGEINETKCSSLARSDLESQKDPIINGAGNASTDTARQGATRNGVAKAVVHPMATSMSVTTSMSLVHSNLVPENGETKLKVKNET* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2991 591 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 207 241 IPR005172 -
Dod04g2991 591 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 121 156 IPR005172 -
Dod04g2991 591 MobiDBLite consensus disorder prediction 378 439 - -
Dod04g2991 591 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 53 570 - -
Dod04g2991 591 MobiDBLite consensus disorder prediction 39 114 - -
Dod04g2991 591 MobiDBLite consensus disorder prediction 54 74 - -
Dod04g2991 591 MobiDBLite consensus disorder prediction 76 90 - -
Dod04g2991 591 ProSiteProfiles CRC domain profile. 120 244 IPR005172 -
Dod04g2991 591 PANTHER TESMIN/TSO1-RELATED 53 570 IPR028307 -
Dod04g2991 591 SMART CXC_2 119 159 IPR033467 -
Dod04g2991 591 SMART CXC_2 204 245 IPR033467 -
Dod04g2991 591 MobiDBLite consensus disorder prediction 298 325 - -
Dod04g2991 591 MobiDBLite consensus disorder prediction 1 27 - -
Dod04g2991 591 MobiDBLite consensus disorder prediction 99 114 - -
Dod04g2991 591 MobiDBLite consensus disorder prediction 378 408 - -
Dod04g2991 591 MobiDBLite consensus disorder prediction 416 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2991 Dod-Chr4 53656880 53662785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2991 1 534 CPP Transcription Factor Family AT4G29000 55.959 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Dod04g2991 TCR 3.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2991 - - gmx:100777698 818.15