Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2975 ATGGCAACCTCGTCAGCTATGGATCAATATGATGAATCCATGAAGAAACAAATAGCATCACTTCTGCGGGTTATGAATTTGGTTAAATCCTTCAAAGAAGACAATACTCCTTGCAAAATTGACGAGGGCCTCTTTTTGGGTTCAGTTGGCACTGCAACTAACAAGGATGCATTGAAAAGCTTGAATATTACTCACATTTTGACCGTTGCCGGTAAACTGCCACCTGCACATCCTGGGGATTTTGTGTATAAAATTATACAAGTTATTGATAAAGAAGATGCCAACTTAAAACAATACTTTGATGAGTGTTTTGATTTTATTGATGAAGCCAAAAGACATGGTGGAGGTGTTTTGGTTCATTGTTTTGCTGGAAAATCAAGGAGTGTCACTGTTGTTGTTGCATATTTGATGAAGACTCGTAGAATGAGCTTATCTGAAGCTCTGCAACATGTAAAGAGCAGACGACCACTGGCAGCTCCGAATTCTGGTTTCATTCGTCAGCTGGAGGACTTTGAAAAATCACTTCAAGTTAAAATTGAAAGTGGATTGTGA 552 0.3877 MATSSAMDQYDESMKKQIASLLRVMNLVKSFKEDNTPCKIDEGLFLGSVGTATNKDALKSLNITHILTVAGKLPPAHPGDFVYKIIQVIDKEDANLKQYFDECFDFIDEAKRHGGGVLVHCFAGKSRSVTVVVAYLMKTRRMSLSEALQHVKSRRPLAAPNSGFIRQLEDFEKSLQVKIESGL* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2975 183 PANTHER BNAA01G23680D PROTEIN 3 178 - -
Dod04g2975 183 CDD DSP 37 170 - -
Dod04g2975 183 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 3 178 - -
Dod04g2975 183 Gene3D Protein tyrosine phosphatase superfamily 14 181 IPR029021 -
Dod04g2975 183 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 97 156 IPR000387 GO:0016311|GO:0016791
Dod04g2975 183 SMART dsp_5 36 174 IPR020422 GO:0006470|GO:0008138
Dod04g2975 183 Pfam Dual specificity phosphatase, catalytic domain 44 173 IPR000340 GO:0008138|GO:0016311
Dod04g2975 183 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 35 176 IPR029021 -
Dod04g2975 183 ProSiteProfiles Dual specificity protein phosphatase domain profile. 36 177 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2975 Dod-Chr4 53525267 53528664 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2975 39 176 Protein tyrosine phosphatase (PTP) family AT3G06110 61.594 3.91e-60 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2975 - - lang:109352945 292.737