Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2971 ATGATGGCGGCTTGTTCTTCTTCCCTTCGGCCCACTCTCTCGTCGTTTAGGTTTTCATCTGTTGCTGCTGCTCCTTCTTCTCGCTCCTTCTCTTTCCTTCGTCTTCCCTACCGCTTCAGAGGAGCAGGGGGTGTTTCAGGAGTTTCTCAATCCCATAGTTTAGGCCTCAAATTGAAAGCATCGAGGGTGCTCAAGCGAGATGGCAACTGCATGAGAGTGATGGCTTCCCAATCCCAAGCAAGCACTGCTGCTTCGCCTGAAAATGTGCTGGAGTGGGTCAAGCAAGACAAGCGCAGGATGCTTCATGTTGTTTATCGTGTTGGGGACTTGGACAGGACCATCAAGTTTTATACTGAGTGCCTGGGAATGAAGCTTCTCAGGAAGCGTGACATACCTGAAGAGAGATATACTAATGTCTTTCTTGGATATGGCCCTGAAGATTCTCATTTTGTTATTGAACTCACATACAATTATGGAGTTGACAAGTATGATATCGGAACTGCATTTGGCCATTTTGGTATTGCTGTTGATGATGTTTCAAAAACAGTGGAACTTATAAGAGCTAAGGGTGGAAAAATAACTAGAGAGCCTGGTCCTGTTAAGGGAGGCAACACAGTGATTGCATTTATTGAAGATCCTGATGGTTACAAATTTGAACTTTTGGAAAGAGGTCCCACTCCTGAGCCTTTGTGCCAAGTAATGCTTCGAGTGGGCGATCTTAATCGTTCCATAGAATTTTATGAGAAGGCTTTTGGCATGGAGCTGCTTCGTACACGAGATAATCCAGAGTACAAGTATACCATAGCAATGATGGGTTATGGTCCAGAGGATAAAAGTACTGTTCTGGAGTTGACTTACAATTATGGAATCACTGAATATGATAAAGGAAATGCTTATGCTCAGACTGCAATTGGCACGGATGATGTGTACAAAACTGCAGAAGCTATTAAACTTGCTGGAGGAAAGATTACTCGGGAACCTGGACCGTTACCCGGTATCAACACAAAAATTACAGCATGCTTGGATCCTGATGGTTGGAAGACGGTTTTTGTAGATAATGTTGATTTTCTTAAGGAGTTGGAGTAG 1086 0.4374 MMAACSSSLRPTLSSFRFSSVAAAPSSRSFSFLRLPYRFRGAGGVSGVSQSHSLGLKLKASRVLKRDGNCMRVMASQSQASTAASPENVLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNVFLGYGPEDSHFVIELTYNYGVDKYDIGTAFGHFGIAVDDVSKTVELIRAKGGKITREPGPVKGGNTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPEYKYTIAMMGYGPEDKSTVLELTYNYGITEYDKGNAYAQTAIGTDDVYKTAEAIKLAGGKITREPGPLPGINTKITACLDPDGWKTVFVDNVDFLKELE* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2971 361 ProSitePatterns Glyoxalase I signature 1. 232 253 IPR018146 GO:0004462|GO:0046872
Dod04g2971 361 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 230 353 IPR029068 -
Dod04g2971 361 CDD GlxI_Ni 230 351 - -
Dod04g2971 361 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 98 228 IPR029068 -
Dod04g2971 361 TIGRFAM glyox_I: lactoylglutathione lyase 230 353 IPR004361 GO:0004462|GO:0046872
Dod04g2971 361 TIGRFAM glyox_I: lactoylglutathione lyase 87 232 IPR004361 GO:0004462|GO:0046872
Dod04g2971 361 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 229 353 IPR037523 -
Dod04g2971 361 PANTHER LACTOYLGLUTATHIONE LYASE 47 361 - -
Dod04g2971 361 ProSitePatterns Glyoxalase I signature 2. 166 178 IPR018146 GO:0004462|GO:0046872
Dod04g2971 361 Gene3D - 226 361 IPR029068 -
Dod04g2971 361 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 100 220 IPR004360 -
Dod04g2971 361 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 232 347 IPR004360 -
Dod04g2971 361 ProSitePatterns Glyoxalase I signature 1. 102 123 IPR018146 GO:0004462|GO:0046872
Dod04g2971 361 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 99 223 IPR037523 -
Dod04g2971 361 PANTHER LACTOYLGLUTATHIONE LYASE, CHLOROPLASTIC-RELATED 47 361 - -
Dod04g2971 361 Gene3D - 69 224 IPR029068 -
Dod04g2971 361 CDD GlxI_Ni 100 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2971 Dod-Chr4 53503585 53507741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2971 232 350 Calmodulin-binding Proteins AT1G08110 26.897 1.23e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2971 K01759 - fve:101314019 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2971 04 53503585 53507741 Dod04g2971 04 53503585 53507741 ECH
Dod04g2971 04 53503585 53507741 Dod02g3539 02 72759605 72761563 PCT