Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2954 ATGGAGGAGGAGTCCCTCGCCTTGGACGAAAAGCAGCTCCAGCGAGTCGACTCGGAGTTTGCTTTGTCGAGTTCAGGTTCTGGCATTTCGTCCGTGCTCAGCTTCGAGGACTTGCGCAGCATCACCAGCGGCTCCGGCGACATTTCCTCCGCCAGCAGCGGCTCCGGCGAGATTCTGCCCACCGAGGCCGCTATCTTGCCGCCGCTGCTTCGACGGACCATGTCGAGTGATGTGGAGGCTGTGATGACGGCGACGGCGATGTCGGTGAGGGAGAAGTGCGTGGGGAAGAAGAACAAAGGAGTGAGTTGGGGACAGACTTCGGTGATTGGGAGGAGGAAGGAGATGGAGGACGCGGTGTCCGTTATTCCGGGATTCATGTCTCGCACGTGTCGCCACGTCGGCGGTTGTACGGCTCCTGGTTCCCAATCCTCCGCCGAGATCTCTCCCCTTCACTTCTTCGGCGTTTACGACGGCCACGGTGGCTCTCAGGTGGCTAAATTTTGTGCCAAGCGGATGCACGATGTTATAGCAGAGGAATGGGACCGAGAAATTATTGACGGTGGCACTGAATGGCAAAGAAGGTGGGAAGCCGTATTTGCTAACGGGTTTGAAAGGACTGACAATGAAATCCTATCAGATGAAGTTGCACCAGAAATGGTTGGATCTACTGCCTCTGTGGTGGTTCTATCTGGCTGCCAAATTATGACATCCAACTGCGGCGACTCAAGGGTAGTTCTTTGCCGCAGGACTCAAACAGTTCCCTTGACAGTGGATCAAAAGCCTGATAGACAAGATGAACTCTTGAGAATTGAAGGAGGAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGTGTTCTTTCCATGTCCAGGGCCATAGGTGATCGGTACTTGAGGCCATGGATTATTCCAGTGCCTGAGATAACTTTTACAGCAAGAACTGATGAGGATGAGTGCTTAATTTTGGCAAGTGATGGACTATGGGATGTAATGACCAATGAAGAGGTTGGGGAAGTTGCGCGCCATATTCTAAGGAGGCGCCGCAGGACCTTGTCAATGGAGGAAATATCTCCTGCACAAGTTGTTGCAAATAGCCTTACTGAGATTGCCTATACTAGAAATAGTAGGGATAACATTTCAATCATAGTAGTTGATCTGAAATCAAAGAGAACACGTCAGCCAAGGCCTCCTTCAATTTCTTAA 1209 0.5128 MEEESLALDEKQLQRVDSEFALSSSGSGISSVLSFEDLRSITSGSGDISSASSGSGEILPTEAAILPPLLRRTMSSDVEAVMTATAMSVREKCVGKKNKGVSWGQTSVIGRRKEMEDAVSVIPGFMSRTCRHVGGCTAPGSQSSAEISPLHFFGVYDGHGGSQVAKFCAKRMHDVIAEEWDREIIDGGTEWQRRWEAVFANGFERTDNEILSDEVAPEMVGSTASVVVLSGCQIMTSNCGDSRVVLCRRTQTVPLTVDQKPDRQDELLRIEGGGGKVINWNGARVFGVLSMSRAIGDRYLRPWIIPVPEITFTARTDEDECLILASDGLWDVMTNEEVGEVARHILRRRRRTLSMEEISPAQVVANSLTEIAYTRNSRDNISIIVVDLKSKRTRQPRPPSIS* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2954 402 ProSiteProfiles PPM-type phosphatase domain profile. 102 388 IPR001932 -
Dod04g2954 402 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 52 397 - -
Dod04g2954 402 PANTHER ALPHABET, ISOFORM E-RELATED 52 397 - -
Dod04g2954 402 SUPERFAMILY PP2C-like 95 389 IPR036457 -
Dod04g2954 402 Gene3D - 91 397 IPR036457 -
Dod04g2954 402 ProSitePatterns PPM-type phosphatase domain signature. 152 160 IPR000222 GO:0043169
Dod04g2954 402 Pfam Protein phosphatase 2C 138 381 IPR001932 -
Dod04g2954 402 CDD PP2Cc 104 388 IPR001932 -
Dod04g2954 402 SMART PP2C_4 91 386 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2954 Dod-Chr4 53317995 53322898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2954 103 398 PP2C-type Phosphatase Gene Family AT4G26080 51.911 3.57e-98 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2954 K14497 - gmx:100793293 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2954 04 53317995 53322898 Dod04g2954 04 53317995 53322898 ECH