Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2945 ATGGGGAGAGCCACAAGGTGGTTGAAGAGCTTGTTTGGGATAAAGAGAGACAAAGAGCGCAAAGAGGATTCAAATCCCAGCACGAAATTGTGCCCTCCTTCTTCTCACTCACACACAGATTCCGGAGGTTTGTGTCACAATCCAGCCACCATACCACCCAACATTTCTCCAGCAGAGGCTGCTTGGCTCCAATCCTTCTACTCAGAAACAGAGAAGGAGCAGAACAAGCATGCCATTGCAGTGGCGGCTGCCACGGCCGCAGCAGCCGATGCTGCCATGGCGGCTGCTCAGGCTGCGGTGGCAGTGGTTAGGCTAACCAGCCATGGAAGAGACACCATGTTTGGTGGTGGACATGAGAAGTTGGCCGCTGTCAAGATCCAAACCGTATTTAAAGGATACTTAGCAAGGAAGGCACTGAGGGCCTTAAAAGCTTTGGTGAAGTTACAGGCACTTGTCAGAGGATACTTGGTGAGGAAGCAAGCAACAGCAACACTGCACGGCATGCAGGCTCTCATTAGAGCTCAAGCAACAGTACGCTCTCGCAAATCTCGCGGCCTCATGACCCCAAAGAATGAAGCACCACATAGGTTCCAAACACAAGCCCGTAGATCCATGGAGAGATATGATGAGAGTAGGAGTGATTACACAGGTCCAATTCATAGCAGAAGGCTATCATCTTCCTTTGATGCCACAATGAATAGTTTTGATGGTAGCCCAAAAATAGTGGAAATGGACACTGGGAGGCCTAAGTCAAGGTCCCGCCGGACCAACACCTCAATCTCAGACTTTGGTGATGACCCTTCATTTCAGGCACTTCCCTCATCCCTCCCAACCCCATCTCGCACCCCTGCACACTTGTCCATAGCAACCAACCGGAATTTCAATGAGTCAGATTGGGGGCTAACAGGGGAAGAGTGCAGGTTCTCTACGGCACAGAGCACTCCACGGTTCACCAACTCTTGCAGTTGTGGTGGGTCTGTTGCGACGCCTAAAAGTGTTTGCACTGATAACATTAACAACAATAACTTTGATGGGCAATGTGACAGTTTTCCAAATTACATGGCCAACACTCAGTCTTTTAAGGCCAAATTGAGGTCTCATAGCGCGCCAAAGCAAAGGCCGGAACCGGGTTCGAAGAAGAGGCTTTCCCTATACGAAATGATGGAATCAAGGAACAGTTTGAGCGGGCTTCGGATGCAGAAGTCTTGCTCGAAGGTTCAGGAAGCCATTAATTTCAAGAATGCTGTGATGGGTAAGCTTGGTAAGTCCACGGAATATAATTTGGTAGGGAGACTGAGAGAAGCCACTTCATCCAGAGGAGGTGGTGATGATTGGTGA 1338 0.4963 MGRATRWLKSLFGIKRDKERKEDSNPSTKLCPPSSHSHTDSGGLCHNPATIPPNISPAEAAWLQSFYSETEKEQNKHAIAVAAATAAAADAAMAAAQAAVAVVRLTSHGRDTMFGGGHEKLAAVKIQTVFKGYLARKALRALKALVKLQALVRGYLVRKQATATLHGMQALIRAQATVRSRKSRGLMTPKNEAPHRFQTQARRSMERYDESRSDYTGPIHSRRLSSSFDATMNSFDGSPKIVEMDTGRPKSRSRRTNTSISDFGDDPSFQALPSSLPTPSRTPAHLSIATNRNFNESDWGLTGEECRFSTAQSTPRFTNSCSCGGSVATPKSVCTDNINNNNFDGQCDSFPNYMANTQSFKAKLRSHSAPKQRPEPGSKKRLSLYEMMESRNSLSGLRMQKSCSKVQEAINFKNAVMGKLGKSTEYNLVGRLREATSSRGGGDDW* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2945 445 Pfam IQ calmodulin-binding motif 122 140 IPR000048 GO:0005515
Dod04g2945 445 Pfam IQ calmodulin-binding motif 143 160 IPR000048 GO:0005515
Dod04g2945 445 MobiDBLite consensus disorder prediction 201 222 - -
Dod04g2945 445 MobiDBLite consensus disorder prediction 235 282 - -
Dod04g2945 445 MobiDBLite consensus disorder prediction 201 217 - -
Dod04g2945 445 Pfam Protein of unknown function (DUF4005) 314 396 IPR025064 -
Dod04g2945 445 SMART iq_5 118 140 IPR000048 GO:0005515
Dod04g2945 445 SMART iq_5 141 162 IPR000048 GO:0005515
Dod04g2945 445 ProSiteProfiles IQ motif profile. 119 147 IPR000048 GO:0005515
Dod04g2945 445 Gene3D - 118 170 - -
Dod04g2945 445 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 424 - -
Dod04g2945 445 PANTHER IQ-DOMAIN 5-RELATED 1 424 - -
Dod04g2945 445 ProSiteProfiles IQ motif profile. 143 170 IPR000048 GO:0005515
Dod04g2945 445 MobiDBLite consensus disorder prediction 27 44 - -
Dod04g2945 445 MobiDBLite consensus disorder prediction 14 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2945 Dod-Chr4 53227608 53233060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2945 1 399 IQD Protein Family AT3G16490 50.367 5.78e-94 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2945 - - var:108346918 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2945 04 53227608 53233060 Dod04g2945 04 53227608 53233060 ECH