Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2934 ATGTCTCTCCTCCACCTCAACAGTAACAGGTTCACCGGCACAGTTCCTGATACATTCAAAGACCTCGCCTCTCTTGAGGAGTTGGACCTCAGCAACAACCAGCTTTCAGGCCCTTTCCCCACAGTTACTTTGTACATGCCAAGCCTTGTCTATTTGGACCTCAGATTCAACTCCTTCTCTGGGCAACTTCCTGATGAGCTTTTCAACAGGAAACTGGATGCAATATTTCTCAACAACAACCAATTTGAAGGTGAAATCCCACAGAACTTGGGAAACTCTCCTGCATCAGTGATAAATTTGGCCAACAACAAGTTGAATGGGAACATCCCAGCAAGTTTTGGGTTCATGGGTTCTAAACTGAAGGAGGTTCTGTTCCTCAATAACCAGTTGACAGGTTGCATTCCTGAAGGGGTGGGGCTATTCACAGAGATGCAAGTCCTGGATGTGAGCTTCAACTCACTCATGGGCCATTTACCGGACACAATATCTTGCCTCCAAGACATAGAGGTCCTCAATTTGGCACATAACAAGCTCTCTGGGGAGTTATCTGATGTGATCTGCTCTCTGAGGAGCCTGGTGAATCTAACTGTTGCTTACAACTTCTTTTCTGGGTTCAGCCAGCAATGCTCAAGGCTTTTCAATGTGGGATTTGATTTCTCAGATAACTGCATTCCGGGAAGGGACATGCAGAGGCCTCAACCAGAGTGTTCTGTGATCCCAGGTGGCAGCCTCAATTGTCTAAGAATCCCTACTCCAAAGCCTCTTGTTTGTGGTTCCCTCGCTGCAATACTCTCTAAGCACACAGATCACGGTTCATCATCTTCACCCTGA 831 0.4681 MSLLHLNSNRFTGTVPDTFKDLASLEELDLSNNQLSGPFPTVTLYMPSLVYLDLRFNSFSGQLPDELFNRKLDAIFLNNNQFEGEIPQNLGNSPASVINLANNKLNGNIPASFGFMGSKLKEVLFLNNQLTGCIPEGVGLFTEMQVLDVSFNSLMGHLPDTISCLQDIEVLNLAHNKLSGELSDVICSLRSLVNLTVAYNFFSGFSQQCSRLFNVGFDFSDNCIPGRDMQRPQPECSVIPGGSLNCLRIPTPKPLVCGSLAAILSKHTDHGSSSSP* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2934 276 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 1 276 - -
Dod04g2934 276 Pfam Leucine rich repeat 4 58 IPR001611 GO:0005515
Dod04g2934 276 PANTHER LRR/EXTENSIN 1 276 - -
Dod04g2934 276 PRINTS Leucine-rich repeat signature 25 38 - -
Dod04g2934 276 PRINTS Leucine-rich repeat signature 165 178 - -
Dod04g2934 276 SUPERFAMILY L domain-like 3 213 - -
Dod04g2934 276 Gene3D Ribonuclease Inhibitor 1 234 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2934 Dod-Chr4 53140874 53142836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2934 1 248 Leucine-rich Repeat extension Gene Families AT3G24480 49.606 7.24e-77 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2934 - - gmx:100820611 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2934 04 53140874 53142836 Dod04g2934 04 53140874 53142836 ECH