Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2933 ATGAAGATCGAGGAATTGGACGATACTGAGTGTAGTAGGGATGAAGAGAAATGCGAGATGCAGATTGTGATGGTTGATTCAAAGAGAGCGTTAGTTGGAGCAGTTGCCCGTATCCTGTTTTATCCCACACTCCTTTATAATGTGGTTCGTAACAAGATTGAAGCTGAGTTCAGGTGGTGGGATCAAGTTGATGAGTTTTTGTTGCTTGGCGCAGTCCCATTCCCCAAAGATGTTCCTCACTTGAAGAAGCTTGGTGTGGGTGGTGTAATTACTCTTAATGAACCTTATGAAACTTTGGTACCATCATCATTGTATCATGCTCATGGGATTGATCATTTGGTAATTCCCACAAGGGATTATCTCTTTGCCCCCTCTCATGTGGATATCAGCCGAGCTGTGCAGTTCATTCATCAGAATGCAACTTGCGGTAAAACTACTTATGTTCACTGTAAAGCTGGGCGAGGGAGGAGTACAACAATTGTGCTTTGCTATCTGGTCGAATACAAGCAAATGACACCTGCTGCTGCCCTGGAATACGTGCGGTCTCGAAGACCTAGAGTGCTACTAGCACCATCGCAATGGAAGGCTGTTCAAAACTATAATAACCACAGGCCTTGTTCTCTAGCTCGCTCTCCCTCTTGGGATGCTGTTCTTATAACCAAAGCTGATCTTGAAGGCTATCATAGCACATGCAATGCTGGTATGGAGCTGGCCATTGTTCCAAAAGTGCCAAAGACTATGCCCATGATATCAAGACTATCTTGCCTGTTCGCATCCTTAAAAGTATCCGGTAATAGTGTACCAATGACCAGGTGGTTGCCAGTTTCTGAATCACGTGCTTGCTAA 846 0.4468 MKIEELDDTECSRDEEKCEMQIVMVDSKRALVGAVARILFYPTLLYNVVRNKIEAEFRWWDQVDEFLLLGAVPFPKDVPHLKKLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAPSHVDISRAVQFIHQNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKQMTPAAALEYVRSRRPRVLLAPSQWKAVQNYNNHRPCSLARSPSWDAVLITKADLEGYHSTCNAGMELAIVPKVPKTMPMISRLSCLFASLKVSGNSVPMTRWLPVSESRAC* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2933 281 CDD PTPMT1 59 203 IPR044596 GO:0004721
Dod04g2933 281 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 52 200 IPR029021 -
Dod04g2933 281 Pfam Dual specificity phosphatase, catalytic domain 81 202 IPR000340 GO:0008138|GO:0016311
Dod04g2933 281 SMART dsp_5 62 203 IPR020422 GO:0006470|GO:0008138
Dod04g2933 281 Gene3D Protein tyrosine phosphatase superfamily 59 205 IPR029021 -
Dod04g2933 281 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311|GO:0016791
Dod04g2933 281 PANTHER - 1 281 - -
Dod04g2933 281 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470|GO:0008138
Dod04g2933 281 PANTHER OS01G0739200 PROTEIN 1 281 - -
Dod04g2933 281 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2933 Dod-Chr4 53125628 53128289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2933 1 269 Protein tyrosine phosphatase (PTP) family AT2G35680 49.847 3.45e-98 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2933 - - adu:107478561 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2933 04 53125628 53128289 Dod04g2933 04 53125628 53128289 ECH