Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2932 ATGAATAAGATCAGCAGCTTGAGCTGTGTTAGCAGCTCGGATCTCATAGATGCAAAGCTCGAAGAGCATCAGCTGTGTGGATCCAAACAGTGCCCCGGTTGTGGACACAAGTTTGAAGGGAAGCCGGACTGGGTAGGTCTACCAGCAGGAGTGAAGTTTGATCCAACAGACCAAGAACTCATAGAACATCTTGAAGCCAAAGTAGAGTCAAAGAACATGAGATCACACCCTTTGATAGATGAGTTCATTCCCACTATTGAAGGAGAAGATGGAATTTGTTACACCCATCCTGAGAAACTTCCAGGAGTAACAAGAGATGGCTTGAGCAGACACTTCTTCCACAGGCCATCAAAGGCTTATACAACAGGAACACGAAAGAGGAGAAAGATTCAAAACGAGTGTGACTTGCAAGGTGGAGAAACAAGGTGGCACAAGACCGGTAAGACCAGGCCAGTGATAGTGAGCGGGAAACAGAAGGGCTGCAAGAAGATTCTAGTACTCTACACCAACTTCGGGAAGAACAGGAAGCCGGAGAAGACCAACTGGGTGATGCACCAGTACCATCTGGGACTGCACGAGGAAGAGAAAGAAGGAGAGCTTGTGGTGTCCAAGATATTCTACCAGACACAGCCAAGGCAGTGCAATTGGTCATCAGATCATAGGAGTCCCACAACTGGTGAAGCAATGAGTGGAGAATTTAACAACAATAACAACAGTGGCAGAAGAGACAGTGGAAGTGGGAGTTGTTCTTCTTCAAAGGAAATACTTACCACTCACAGTCACACAGATGATATGTCTGCGGTTGTTGGTGTGAGTGTCCCTCCAATCACAAGCTTCACCACTGCCTTGGATAATATTCAACACCTGAAATCAGACCATTTCGGCTTCACCCCATTCAGAAAGGGCTTCGATGAGGTTGGAATAGGAGAACCTTCCACAGCAAGAGAAGTGCAAGCATCAGGGTCATGCGAAGAAGTACATGAACGAGTACATAATCATCATCATCAACAACAACAACAACAGCATGCGCACCAACAAATTGCAACCACAGCGTTCCATATCAGTAGGCCTTCACATCCCATCTCCACCATCATCTCTCCACCTCCGCTCCACCACACATCCATCATCCTAGACGACAACGCTTATCATGTCTCCAGAATAATGCTCCAAAATGAAAACTTCCAGCAGCAGCAGCAGCAGCAGCTGCAACATCATAAACTAGGAGGGAGGTCTGCGTCTGGTTTGGAGGAACTCATTATGGGGTGCACTGCTACTGATGTCAAAGAGCCATCCATCACAAACCCACAAGAAGCTGCTGAATGGTTGAAGTACTCTTCTTACTGGCCTGACCCGGGTCATCATGGGTAG 1368 0.4722 MNKISSLSCVSSSDLIDAKLEEHQLCGSKQCPGCGHKFEGKPDWVGLPAGVKFDPTDQELIEHLEAKVESKNMRSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVIVSGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGLHEEEKEGELVVSKIFYQTQPRQCNWSSDHRSPTTGEAMSGEFNNNNNSGRRDSGSGSCSSSKEILTTHSHTDDMSAVVGVSVPPITSFTTALDNIQHLKSDHFGFTPFRKGFDEVGIGEPSTAREVQASGSCEEVHERVHNHHHQQQQQQHAHQQIATTAFHISRPSHPISTIISPPPLHHTSIILDDNAYHVSRIMLQNENFQQQQQQQLQHHKLGGRSASGLEELIMGCTATDVKEPSITNPQEAAEWLKYSSYWPDPGHHG* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2932 455 Gene3D NAC domain 56 212 IPR036093 GO:0003677|GO:0006355
Dod04g2932 455 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 427 IPR044799 GO:0003700
Dod04g2932 455 SUPERFAMILY NAC domain 43 208 IPR036093 GO:0003677|GO:0006355
Dod04g2932 455 MobiDBLite consensus disorder prediction 213 261 - -
Dod04g2932 455 ProSiteProfiles NAC domain profile. 47 208 IPR003441 GO:0003677|GO:0006355
Dod04g2932 455 Pfam No apical meristem (NAM) protein 48 189 IPR003441 GO:0003677|GO:0006355
Dod04g2932 455 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 3 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2932 Dod-Chr4 53113754 53118509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2932 11 448 NAC Transcription Factor Family AT5G56620 51.820 6.97e-136 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod04g2932 NAM 5.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2932 - - gmx:100794811 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2932 04 53113754 53118509 Dod04g2932 04 53113754 53118509 ECH