Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2923 ATGGGAAGAACTCCATGTTGTGACAAAGCCAACGTGAAAAGAGGACCATGGTCTCCTGAAGAAGATGCAACCCTCAGAAACTACCTCAAGAAACATGGCACCGGTGGTAATTGGATAGCTCTCCCACAGAAAGCAGGCCTAAAGCGGTGGTCCCTTATAGCAGCTCAACTACCTGGGAGAACGGATAACGATGTGAAAAACCATTGGAACACAAAGCTAAAGAAAAAGTTTTTGGCAGGAAACACCAATGCCATCGGTAACACTGGTTATCCACAGTTGTCAACCTCCATTCCTCAGCAGCCTCAAGCTGAAGCCTTAGTCTTTGAACATGAGAACTCAGGTTGTTTTGATTCCCGTGTTTCGTGTTCTGAGCAAAAACCAATTCCAGTTCCTTTGTTGGAATCGGATGCTAATTCAGGTCTAGGCAGCAGCCCGAGTAATAGTTTTTGTGTACCACTTGCTAAGGGTCTTTCAGATTCAGCTTCCTTGGCAAAGGAGCAAGAAGATGGTAATTGGCTTGGCTATTATGAGCATGGAGGTGAAGATAATGATGCATTTTTGCTTGATTTTGTGTATGATGATCTCCTGCATAATGGATTTGCTTCTCAAGACAAAAGCAGCAATCATCTGCCTAATCTCTAG 642 0.4408 MGRTPCCDKANVKRGPWSPEEDATLRNYLKKHGTGGNWIALPQKAGLKRWSLIAAQLPGRTDNDVKNHWNTKLKKKFLAGNTNAIGNTGYPQLSTSIPQQPQAEALVFEHENSGCFDSRVSCSEQKPIPVPLLESDANSGLGSSPSNSFCVPLAKGLSDSASLAKEQEDGNWLGYYEHGGEDNDAFLLDFVYDDLLHNGFASQDKSSNHLPNL* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2923 213 Gene3D - 11 77 - -
Dod04g2923 213 SUPERFAMILY Homeodomain-like 2 80 IPR009057 -
Dod04g2923 213 SMART sant 13 75 IPR001005 -
Dod04g2923 213 ProSiteProfiles Myb-like domain profile. 9 73 IPR001005 -
Dod04g2923 213 Pfam Myb-like DNA-binding domain 14 71 IPR001005 -
Dod04g2923 213 CDD SANT 16 73 IPR001005 -
Dod04g2923 213 PANTHER OS09G0431300 PROTEIN 1 49 - -
Dod04g2923 213 PANTHER OS09G0431300 PROTEIN 49 167 - -
Dod04g2923 213 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 77 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2923 Dod-Chr4 52997803 52999102 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2923 1 79 MYB Transcription Factor Family AT5G57620 53.782 6.56e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod04g2923 Myb_DNA-binding 1.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2923 K09422 - gmx:778160 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2923 04 52997803 52999102 Dod04g2923 04 52997803 52999102 ECH