Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2916 ATGACTTTCAAGTGTATGATCCGCATAGAGTTTTTTGGGGGTGTAACAGTTGAACTACAAGGTAGGATTAACGATTGCAAGGCCCTTACATACCGACAAGACATCAAGGCCAAGGACATTGAAGCCTACAGATTAATGCTTTACTGTTCCAACACATCAGGTTGGTTGGTTAATGCTTTACTGTTCCAATGTTCTTATGAACTTAAAGCAATTGCATTAGCTGCCTTTCAATGTGGGAAAGTTAGTTGGTATCAGAAAGTATGGTTGTATGAATATCAGAAAGAAAGGATGTTTAGGTGGGCTTATGTTGTGATTACAACTCCTGATGGTGTTTTGGATCATGAAGAGGCTGTTAAAAGGAACGTAGGTGGCCAGGCTCTTGGTTACTGTCACAGAAAAAATCATGTTATTTTGGCCAACTATTGTGTTCGGCTATATTCCCTTTAA 447 0.3937 MTFKCMIRIEFFGGVTVELQGRINDCKALTYRQDIKAKDIEAYRLMLYCSNTSGWLVNALLFQCSYELKAIALAAFQCGKVSWYQKVWLYEYQKERMFRWAYVVITTPDGVLDHEEAVKRNVGGQALGYCHRKNHVILANYCVRLYSL* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2916 148 PANTHER 40S RIBOSOMAL PROTEIN S15A-5 12 131 - -
Dod04g2916 148 Gene3D - 24 131 - -
Dod04g2916 148 SUPERFAMILY Ribosomal protein S8 93 130 IPR035987 GO:0003735|GO:0005840|GO:0006412
Dod04g2916 148 PANTHER 40S RIBOSOMAL PROTEIN S15A 12 131 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2916 Dod-Chr4 52929820 52932062 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2916 13 131 Cytoplasmic Ribosomal Protein Gene Family AT2G19720 41.176 6.82e-24 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2916 K02957 - jre:108989768 97.8265