Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2906 ATGAGTGGCAAAAAGGATCGTTATGAAGAAGAGATGGGTTCCTCAGATGGCACCGGCAAAGTGGTGGTGGTTGCAGTTAGAGCTTCAAGAGATATCTCAAGGACTGCTTTGGTGTGGGCTTTGACTCATGTTGTTCAACCAGGGGATTGCATTAAGCTTTTGGTTGTCATTCCAGCTTTCTCCTCAAGCAAGAGGACTTGGGGGCTTTCAAGGTTTACTACTGATTGTACCACTAGTCACTGGAAATCCCATTTGGGAACGGCTTCAGATCAGAAAGAAATTATTGCAAATTCCTGTTCTCAATTGGTGCTTCAACTCCATGATTTATATGATCCGGAGAAGATAGAGATCAGAGTTAAGATTCTCTCTGGTTCTTTAGATGGAGCAGTGGCTGCTGAAGCAAAGAGGGTCGAATCTAGCTGGGTTATATTGGACAAAAAATTGAAACATGAAAAGAAATACTGCATGGAGCAGCTGCATTGCAATATTGTAGCTATGAAGAGATCGAGGGCAAAGATTCTACGCTTGAATTTGAACAGTTCACCAAAGATGGAACTTAACGGGGGTTGTTCATTGTCACTGGAGCTTAATGCATATGCAAGAAACTTGAAGGACAACTCTGAACATGTAGATATAATTAGAGGCCCTGCTGTTACTCCTGCTAGTAGTCCAGAGCAAGGGTCACCACTGTTGACTGCAACTGATATTGGAACATCATCACTATCAAGCTCAGATCCGGGGACTTCACCATTTTTCCACTCTGATATTTATGAAAGAAGAAGGAGAACTTTTCCCTTTGTTCATGAGGGACTGACAAGTCTGGAGGATATTGAATCTGATTCAGAGAGTGAAAAGCTTAGTTTATCATCCAAAAGTTCATATTTTCAGCCGTGGATTGCTAATGTAATTTGTATTGATGGTGAGTTCCCAAAACATGATGACTATATGCAAAGATCAAGCGACAAAGATTTGGTTTCTACGTATGAAGCTGTGCTTCAGAAATTGTCAAAGTTGGATCAAGATCCTGTCTTAGGAGTACTTAATTGCAAGATTGATGTGAACTTAAGCAAGAGTGTTAGAGAGGCAGTCTCACTAGCCAGAAGTGCACCCCCTGGACCTCCTCCATTGTGCTCTATTTGTCAGCACAAGGCACCTGTATTTGGGAATCCTCCAAGGTGGTTTACATTTGCTGAATTGCAACTTGCCACCGGCGGCTTTTCACAAGCAAATTTCTTGGCTGAAGGTGGCTTTGGTTCTGTACACCGTGGTGTCCTACCTGATGGACAGGTCATTGCTGTCAAGCAGTATAAATTAGCCAGCACTCAAGGAGATAAAGAATTTTGCTCAGAAGTAGAGGTCTTAAGTTGTGCACAACATCGTAATGTTGTGATGCTAATTGGGTTTTGTGTGGAGGATGGTAGAAGATTGCTAGTTTATGAATACATCTGCAATAGCTCTCTGGATTCACATCTTTATGGAAGAAAGCAGAATATACTGGAATGGTCTGCAAGACAAAAAATAGCAGTTGGAGCAGCTCGTGGTTTAAGATACCTTCATGAAGAATGTAGAGTGGGTTGTATTGTGCACCGTGATATGCGGCCTAACAATATCCTTCTCACACATGATTTTGAAGCACTAGTAGGAGATTTTGGACTTGCCAGGTGGCAGCCAGATGGAGATTTGGGTGTGGAAACCAGGGTTATAGGAACATTTGGGTATCTGGCGCCAGAGTATGCTCAAAGTGGTCAAATTACTGAAAAAGCAGATGTGTACTCCTTTGGTATAGTATTATTGGAGCTTGTTACAGGAAGGAAAGCTGTGGATATAAACAGGCCCAAAGGCCAGCAATGCCTCAGTGAATGGGCACGGCCATTGCTTGAAGAAGATGCCATTCTTGAACTAGTTGATCCGAGCATAAGGAACTGCTATAATGATCAAGAGGTTCATCGCATGCTGCAATGTTCCTCTTTGTGCATCAGGCGAGATTCTCATTCAAGGCCTAGAATGTCTCAGGTGCTGAGGATGCTGGAAGGTGACATTCTCATGTGA 2049 0.428 MSGKKDRYEEEMGSSDGTGKVVVVAVRASRDISRTALVWALTHVVQPGDCIKLLVVIPAFSSSKRTWGLSRFTTDCTTSHWKSHLGTASDQKEIIANSCSQLVLQLHDLYDPEKIEIRVKILSGSLDGAVAAEAKRVESSWVILDKKLKHEKKYCMEQLHCNIVAMKRSRAKILRLNLNSSPKMELNGGCSLSLELNAYARNLKDNSEHVDIIRGPAVTPASSPEQGSPLLTATDIGTSSLSSSDPGTSPFFHSDIYERRRRTFPFVHEGLTSLEDIESDSESEKLSLSSKSSYFQPWIANVICIDGEFPKHDDYMQRSSDKDLVSTYEAVLQKLSKLDQDPVLGVLNCKIDVNLSKSVREAVSLARSAPPGPPPLCSICQHKAPVFGNPPRWFTFAELQLATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNSSLDSHLYGRKQNILEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGDLGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELVTGRKAVDINRPKGQQCLSEWARPLLEEDAILELVDPSIRNCYNDQEVHRMLQCSSLCIRRDSHSRPRMSQVLRMLEGDILM* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2906 682 Gene3D Phosphorylase Kinase; domain 1 378 481 - -
Dod04g2906 682 ProSiteProfiles Protein kinase domain profile. 406 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2906 682 MobiDBLite consensus disorder prediction 217 247 - -
Dod04g2906 682 SUPERFAMILY Protein kinase-like (PK-like) 386 677 IPR011009 -
Dod04g2906 682 Gene3D Transferase(Phosphotransferase) domain 1 482 680 - -
Dod04g2906 682 ProSitePatterns Tyrosine protein kinases specific active-site signature. 527 539 IPR008266 GO:0004672|GO:0006468
Dod04g2906 682 Pfam Protein tyrosine and serine/threonine kinase 410 676 IPR001245 GO:0004672|GO:0006468
Dod04g2906 682 MobiDBLite consensus disorder prediction 221 247 - -
Dod04g2906 682 CDD STKc_IRAK 412 678 - -
Dod04g2906 682 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 17 682 - -
Dod04g2906 682 PANTHER OS01G0253100 PROTEIN 17 682 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2906 Dod-Chr4 52856123 52861070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2906 365 672 Trihelix Transcription Factor Family AT1G68690 50.321 1.71e-100 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Dod04g2906 PK_Tyr_Ser-Thr 2.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2906 - - aprc:113855006 1219.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2906 04 52856123 52861070 Dod04g2906 04 52856123 52861070 ECH