Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2905 ATGGGCAGGAAGTGCTCACATTGTGGGAACATAGGCCATAATTCTAGGACCTGCACATCTTTCAGAGGGACTACTTCCTTTGTAGGAGGACTTCGCCTCTTTGGCGTGCAATTTGACTTAACCTCTTTTTCTTCTTATTCTTCTTCTTCTTCTCTTAACATCAAGAAAAGCTTTAGTATGGACTCCTTGCCCTCATCACCCTCTCCATCTTCCCCTTTATCTTCACCTAGAATAGCCATTGATGAAAATTCTGACAGAAGCTCTATTGGCTATCTATCAGATGGTCTCTTAGGTACGGCTCAAGAGAGGAAGAAAGGAGTCCCATGGACAGAAGAGGAGCACCGAATATTCCTTGTTGGACTTGAGAAGATGGGAAAAGGAGACTGGAGGGGCATCTCTAAAAACTTCGTGACAACAAGAACCCCAACTCAAGTCGCTAGCCATGCTCAGAAGTACTTTCTTCGGCTTGCAACCATAAACAAGAAGAAGCGACGTTCAAGTCTCTTTGACATGGTTGGTAGCAGCAACATCAAGAATCCTATTACTAGTTCTAATTGCAATTCTGGCAGTTCATCAGTTTCCACTAATTATCAACCGGATAAGCCTGAATGTGAAGTTGAGAATGATGCCACTTTGTCATTGCTAGGGCGCCTTACCTTTCTTCAACAAGAAACCAATTCGAAAAACCAAGAAACTCAAGATTGTTACTCTCGAGTTCATAATTATCAAGCTGCAGAACCTCAGGCTGTGCCGGCTAAGTGGTTACATCCTCACATGAAATTATCTTCAGATATTAATGTGGGAATTCCCAGTTCCCCAAATACAGCAGCAGTACCTGATCTGGAGCTCACTCTTGCAGCCCCAAAGGCCAAGACCCTGGAACAAAAAAAATCGCCTCCTGGTCCATTCCTGCTTGGGCCAATTATAGCCTGA 933 0.4394 MGRKCSHCGNIGHNSRTCTSFRGTTSFVGGLRLFGVQFDLTSFSSYSSSSSLNIKKSFSMDSLPSSPSPSSPLSSPRIAIDENSDRSSIGYLSDGLLGTAQERKKGVPWTEEEHRIFLVGLEKMGKGDWRGISKNFVTTRTPTQVASHAQKYFLRLATINKKKRRSSLFDMVGSSNIKNPITSSNCNSGSSSVSTNYQPDKPECEVENDATLSLLGRLTFLQQETNSKNQETQDCYSRVHNYQAAEPQAVPAKWLHPHMKLSSDINVGIPSSPNTAAVPDLELTLAAPKAKTLEQKKSPPGPFLLGPIIA* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2905 310 CDD SANT 108 153 IPR001005 -
Dod04g2905 310 SMART sant 105 155 IPR001005 -
Dod04g2905 310 ProSiteProfiles Myb-like domain profile. 101 153 IPR001005 -
Dod04g2905 310 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 305 - -
Dod04g2905 310 ProSiteProfiles Zinc finger CCHC-type profile. 3 20 IPR001878 GO:0003676|GO:0008270
Dod04g2905 310 Gene3D - 107 160 - -
Dod04g2905 310 Pfam Myb-like DNA-binding domain 108 153 IPR001005 -
Dod04g2905 310 PANTHER TRANSCRIPTION FACTOR KUA1 1 305 - -
Dod04g2905 310 SUPERFAMILY Homeodomain-like 102 157 IPR009057 -
Dod04g2905 310 MobiDBLite consensus disorder prediction 183 201 - -
Dod04g2905 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 157 IPR017930 -
Dod04g2905 310 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 104 155 IPR006447 GO:0003677
Dod04g2905 310 MobiDBLite consensus disorder prediction 183 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2905 Dod-Chr4 52845212 52846771 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod04g2905 Myb_DNA-binding 1.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2905 - - gmx:778093 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2905 04 52845212 52846771 Dod04g2905 04 52845212 52846771 ECH