Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2892 ATGGCAGGTGCGATGAAGAAGGTCGACAAGATTCGCCAAATCGTGCGTTTGAAACAGCTCGTCATGCGGTGGAAGACCATGAGCCTCCGCCGCCGCACCACCTTCCACCACCACTCTTCCTCTTCGTATTCCGATTCCCTCGAGTCCAAGCCATGCGCGTCACCGCGACGCGCCCCCTCCGGGTTCGTCTTCGTGTACGTCGGGGCTGAACGCAAGCGTTTCGTGATCCCGGCCCGGTTCCTTAACCTCCCAGTCTTCGCTGGTCTCCTCAAAGAAACCGAAGAAGTGTTCGGTCTTCGATGCACCGGTGGTTTGGTTCTTCCCTGTGAAGTGGCTTTCTTCAGTGACATCGTGAAGCACCTCGAGAAGGACGAGAGCAAATACGGGAAGCTCTCTCTGGAGGAGTTCGTGAACATGGTCTCTGAGGTTGGTTCTGATTCTTGCTGCAAGGAAAGCATTGTTGCTTTCACTCCTCTGTTGCAGAAAGCAAGGGTTTGA 498 0.5502 MAGAMKKVDKIRQIVRLKQLVMRWKTMSLRRRTTFHHHSSSSYSDSLESKPCASPRRAPSGFVFVYVGAERKRFVIPARFLNLPVFAGLLKETEEVFGLRCTGGLVLPCEVAFFSDIVKHLEKDESKYGKLSLEEFVNMVSEVGSDSCCKESIVAFTPLLQKARV* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2892 165 Pfam Auxin responsive protein 23 120 IPR003676 GO:0009733
Dod04g2892 165 PANTHER - 1 154 - -
Dod04g2892 165 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 154 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2892 Dod-Chr4 52763997 52764635 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2892 7 135 Calmodulin-binding Proteins AT3G43120 31.373 1.04e-20 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2892 K14488 - vvi:100266954 187.193