Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2881 ATGGCTATCACTGGTAGGCCTTGTCATTGTTGCATCATCATCACATTCACCACCCTCCTCTTCCTATGTCTTGTTGCATCCTCCAATGGTGCCTCGGACAAAGAATTGCTCCTCAAGGTGAAGGGCAACCTGCAAAACACCGATGCATTGTCTTCATGGAGCACATCAACCTCTCCATGTTCAGGTAATAAGCCCAACTGGAGAGGCGTTCTCTGCCAGGGTGGAGGGATGATATCGGGCTTGTCACTTGTGAAGATGGGGCTCAAGGGGACCATTGATGTGGACTCCCTCAAGGGGTTACCATATCTTAGAACCTTAAACTTGATGAACAATGAATTTGATGGTGCATTGCCAAATATAGGGAAGCTAGTTGGTTTGAGGGGAATTTACCTTTCGAATAACAAGTTTTCTGGAGAGATCCCTGGGGACGCTTTTGAAGGCTTGCAGTGGTTGAAGAAAATCGTCTTGTCAAACAACCAGCTTACGGGTGCTATTCCAGCTTCTCTTGGAAACCTGCCAAAGCTTATGGAGGTGAGGTTGGATGGGAATCAATTCAGTGGCCCTATTCCTCCATTTCAAAAGGCCAATTTGCTTTCATTCAACGTATCAAACAATCAGTTGGATGGCCCAATACCACCCTCGCTTACCAAGTGGTCTCCCGATTCCTTTGCTGCAGGTAATAAAGAGTTATGTGGAGCCCCGCTGGGTACATGTGATTCGAAGCCAAATTCTTCTCCTCCTCCTCCGGATTCTTCAGATTCGAATTCTTCGAAGAAGCCGTCAACTGTGAGTATTATTGTGGTTGCCGTAGTTGTTGGTTTGGCAGTGATAGTTATTGGAGCAGTAATACTCATCCTTCACCAAGCACAAAAAAGAATGAATGCAGAGATGAAAGCCATGACAGAATCTGAGCAGAAGAAGAAGCCAGAAGATTCTTTCTTTCAGGGTCGTGCAAGGTACAGAAGATACACTATCGAGGAAATTGAAGAAGCAACAAAATGCTTTTCCAATTCTCTCAAGATCGGTGAAGGAGGTTATGGACCAGTCTATAGGTGTGAACTAGATCACACACCAGTTGCAATAAAAGTTTTAAAGCCTGATGCAGCTCAAGGACGGTCACAATTTCAGCAGGAGGTTGAAGTGCTAAGTTGCATAAGGCATCCAAACATGGTTCTCCTCCTTGGAGCTTGCCCAGAGTATGGCTGCCTAGTTTATGAATACATGGCTCATGGTAGCTTGGACGACTGCCTCTTCCGGAGAGGCAACTCTCCAGCTCTTCCCTGGCAGCTAAGATTCCGAATTGCTGCTGAGATTGCCACCAGCCTGCTTTTCCTCCACCAGACAAAACCAGAACCACTGGTACACCGCGACTTGAAACCGGGAAACATTTTGCTTGACCGCAACTTTGTGAGCAAGATCAGTGATGTGGGGTTAGCCAGGCTTGTCCCTCCTTCAGTTGCAGACTCCGTGACGCAGTACCGCATGACATCAACTGCAGGAACTTTCTGTTACATTGATCCTGAGTACCAGCAAACTGGCATGCTAGGAATCAAGTCTGATATTTACTCACTGGGAATCATGCTTCTACAGATTTTAACTGCCAAGCCACCAATGGGTTTGACACACCATGTTGGAAGGGCCATTGAGAAGGGTACTTTTGCTGAGATGCTTGACCCTGCTGTTGAGGACTGGCCAGTTGAACATGCCTTGCACTTTGCCAAGCTTGCCCTACAGTGTGCAGAAATGAGAAGAAAAGATAGACCTGACCTTGGGAAAGTTGTATTGCCTGAGCTGAATAAACTCAGAGCTTTTGCTGACGACAGCATGCCCGTGATGATGATGTTTGGTCTTACCGCGAGAAGCATTAAAAAAAGTAACCACAACAATTCCTCATGCTCCACATTTTCCTCAGTTCAAGATGGTTACAGTGAATCTCATTCACTGTCTGAAATGTCCGATTATGATAGCCGTTCAAGCACATCTTCACAGGGGAGAATGTGA 2001 0.4623 MAITGRPCHCCIIITFTTLLFLCLVASSNGASDKELLLKVKGNLQNTDALSSWSTSTSPCSGNKPNWRGVLCQGGGMISGLSLVKMGLKGTIDVDSLKGLPYLRTLNLMNNEFDGALPNIGKLVGLRGIYLSNNKFSGEIPGDAFEGLQWLKKIVLSNNQLTGAIPASLGNLPKLMEVRLDGNQFSGPIPPFQKANLLSFNVSNNQLDGPIPPSLTKWSPDSFAAGNKELCGAPLGTCDSKPNSSPPPPDSSDSNSSKKPSTVSIIVVAVVVGLAVIVIGAVILILHQAQKRMNAEMKAMTESEQKKKPEDSFFQGRARYRRYTIEEIEEATKCFSNSLKIGEGGYGPVYRCELDHTPVAIKVLKPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMAHGSLDDCLFRRGNSPALPWQLRFRIAAEIATSLLFLHQTKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQILTAKPPMGLTHHVGRAIEKGTFAEMLDPAVEDWPVEHALHFAKLALQCAEMRRKDRPDLGKVVLPELNKLRAFADDSMPVMMMFGLTARSIKKSNHNNSSCSTFSSVQDGYSESHSLSEMSDYDSRSSTSSQGRM* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2881 666 MobiDBLite consensus disorder prediction 646 666 - -
Dod04g2881 666 PANTHER OS02G0152300 PROTEIN 288 666 - -
Dod04g2881 666 Pfam Leucine rich repeat 126 185 IPR001611 GO:0005515
Dod04g2881 666 Gene3D Ribonuclease Inhibitor 197 242 IPR032675 -
Dod04g2881 666 SMART serkin_6 335 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2881 666 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 288 666 - -
Dod04g2881 666 Gene3D Ribonuclease Inhibitor 30 196 IPR032675 -
Dod04g2881 666 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Dod04g2881 666 Pfam Protein kinase domain 338 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2881 666 Gene3D Phosphorylase Kinase; domain 1 314 407 - -
Dod04g2881 666 MobiDBLite consensus disorder prediction 234 259 - -
Dod04g2881 666 ProSiteProfiles Protein kinase domain profile. 335 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2881 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Dod04g2881 666 Coils Coil 286 306 - -
Dod04g2881 666 SUPERFAMILY L domain-like 58 217 - -
Dod04g2881 666 SUPERFAMILY Protein kinase-like (PK-like) 313 594 IPR011009 -
Dod04g2881 666 Gene3D Transferase(Phosphotransferase) domain 1 408 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2881 Dod-Chr4 52670836 52682923 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2881 288 621 Receptor kinase-like Gene Family AT1G78940 71.856 4.84e-174 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Dod04g2881 Pkinase 1.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2881 - - gmx:100803837 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2881 04 52670836 52682923 Dod04g2881 04 52670836 52682923 ECH