Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2847 ATGGAAGACGCAGAAACAAAGCAAAGGATCGAGGAAAGGGTTCGGAGGATTCTGGAAGAATCGGACATGGACAAGGTCACCGAGTCCAAGATTCGTAAGCAGGCATCCAGCGAACTGGGCCTCGACCTCTCCCAACCCCACTTCAAAGCCTTCGTCAAGAAGGTTGTCGAAGCTTTTCTCCAAGAGAAGCAGGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGCACAAGAGGAGGGAGAAGGTTCCAAAGACAACAGGGAGTACGATGATGAAGGCGATCTCATCATCTGCAAGCTTTCGGAGAGGAGAAGGGTGACCATCCAGGATTTCAGAGGCAAAACATTGGTCTCCATTCGCGAGTATTATCAAAAAGACGGAAAGGTTCTTCCTACTTCCAAAGGAATAAGTTTGACAGAGGAGCAGTGGACAGCCTTTAAAAAAAATGTGCCTGCTATAGAAAAAGCCATTAAAAAAATGGAGTCACGCTGCACATAA 495 0.4626 MEDAETKQRIEERVRRILEESDMDKVTESKIRKQASSELGLDLSQPHFKAFVKKVVEAFLQEKQEQEEEEEEEEAQEEGEGSKDNREYDDEGDLIICKLSERRRVTIQDFRGKTLVSIREYYQKDGKVLPTSKGISLTEEQWTAFKKNVPAIEKAIKKMESRCT* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2847 164 Pfam Transcriptional Coactivator p15 (PC4) 97 148 IPR003173 GO:0003677|GO:0006355
Dod04g2847 164 Pfam DEK C terminal domain 5 60 IPR014876 -
Dod04g2847 164 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP 4 162 - -
Dod04g2847 164 Coils Coil 49 85 - -
Dod04g2847 164 Gene3D - 2 64 - -
Dod04g2847 164 MobiDBLite consensus disorder prediction 62 89 - -
Dod04g2847 164 PIRSF RNA_polymII_KELP 1 163 IPR017415 -
Dod04g2847 164 SUPERFAMILY DEK C-terminal domain 4 61 - -
Dod04g2847 164 MobiDBLite consensus disorder prediction 63 78 - -
Dod04g2847 164 Gene3D Transcriptional Coactivator Pc4; Chain A 86 163 IPR009044 GO:0003677|GO:0006355
Dod04g2847 164 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 4 162 IPR045125 GO:0003713|GO:0060261
Dod04g2847 164 SUPERFAMILY ssDNA-binding transcriptional regulator domain 96 158 IPR009044 GO:0003677|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Dod04g2847 DEK_C 7.1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2847 K25815 - gmx:100499671 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2847 04 52378370 52380711 Dod04g2847 04 52378370 52380711 ECH