Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod04g2847 | ATGGAAGACGCAGAAACAAAGCAAAGGATCGAGGAAAGGGTTCGGAGGATTCTGGAAGAATCGGACATGGACAAGGTCACCGAGTCCAAGATTCGTAAGCAGGCATCCAGCGAACTGGGCCTCGACCTCTCCCAACCCCACTTCAAAGCCTTCGTCAAGAAGGTTGTCGAAGCTTTTCTCCAAGAGAAGCAGGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGCACAAGAGGAGGGAGAAGGTTCCAAAGACAACAGGGAGTACGATGATGAAGGCGATCTCATCATCTGCAAGCTTTCGGAGAGGAGAAGGGTGACCATCCAGGATTTCAGAGGCAAAACATTGGTCTCCATTCGCGAGTATTATCAAAAAGACGGAAAGGTTCTTCCTACTTCCAAAGGAATAAGTTTGACAGAGGAGCAGTGGACAGCCTTTAAAAAAAATGTGCCTGCTATAGAAAAAGCCATTAAAAAAATGGAGTCACGCTGCACATAA | 495 | 0.4626 | MEDAETKQRIEERVRRILEESDMDKVTESKIRKQASSELGLDLSQPHFKAFVKKVVEAFLQEKQEQEEEEEEEEAQEEGEGSKDNREYDDEGDLIICKLSERRRVTIQDFRGKTLVSIREYYQKDGKVLPTSKGISLTEEQWTAFKKNVPAIEKAIKKMESRCT* | 165 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod04g2847 | 164 | Pfam | Transcriptional Coactivator p15 (PC4) | 97 | 148 | IPR003173 | GO:0003677|GO:0006355 | |
Dod04g2847 | 164 | Pfam | DEK C terminal domain | 5 | 60 | IPR014876 | - | |
Dod04g2847 | 164 | PANTHER | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP | 4 | 162 | - | - | |
Dod04g2847 | 164 | Coils | Coil | 49 | 85 | - | - | |
Dod04g2847 | 164 | Gene3D | - | 2 | 64 | - | - | |
Dod04g2847 | 164 | MobiDBLite | consensus disorder prediction | 62 | 89 | - | - | |
Dod04g2847 | 164 | PIRSF | RNA_polymII_KELP | 1 | 163 | IPR017415 | - | |
Dod04g2847 | 164 | SUPERFAMILY | DEK C-terminal domain | 4 | 61 | - | - | |
Dod04g2847 | 164 | MobiDBLite | consensus disorder prediction | 63 | 78 | - | - | |
Dod04g2847 | 164 | Gene3D | Transcriptional Coactivator Pc4; Chain A | 86 | 163 | IPR009044 | GO:0003677|GO:0006355 | |
Dod04g2847 | 164 | PANTHER | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR | 4 | 162 | IPR045125 | GO:0003713|GO:0060261 | |
Dod04g2847 | 164 | SUPERFAMILY | ssDNA-binding transcriptional regulator domain | 96 | 158 | IPR009044 | GO:0003677|GO:0006355 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Coactivator p15 | Dod04g2847 | DEK_C | 7.1e-16 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod04g2847 | K25815 | - | gmx:100499671 | 231.491 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod04g2847 | 04 | 52378370 | 52380711 | Dod04g2847 | 04 | 52378370 | 52380711 | ECH |