Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2820 ATGCATCATTACACATCAACATTTATTTTCTACTATGCAATGGGAACCATATTTTTCCTACACATAACTCCCCTAGCAATTCCACTCTCATTTGATTACCCCAACTTTAATTATGGTGAAGTCAACGTGGAAGGAGATGCTTATTTTCTAAAACAAGGTATCCAAATCACTGTGAACACCATGGACCAAAACAACAATTACAGTGTTGGGAGAGTCACAAGTCATAAACACATGCGACTCTGGGACAAGAACTCTTCGAAGCTTGCTGACTTCAAAACCGAATTCTCCTTTGTTGTTTATGCAGATCACAAGAGTAAGCATGGAGATGGGTTGGCATTCTTCTTGGCAGACCCAAATCTACCACTTCTAGAGGATATTGAAGAAGGAGGTGGCCTTGGCCTTGTCGATGGTAACCAAGTATTGAATTCAACACAACACTCATTTGTGGCAGTGGAGTTTGATACCTTTCAAAATCCATGGGATCCAAGTGGCCTTCATATAGGTATGAATTTCAACTCTATGAGGTCTAAAATAACTAAGCCAGTGTTCATGGATATTTGGAGCAGAAAAATCTATAACTGCAGCATTGAGTACAGTTCCAGCACCCTCAATTTAAGCGTTTTATTTTCTGGTTACAAACATGATAGAATAGCTAAAACATACATTTCATACAAAGTTGATTTGAGAGATTACTTACCAGAGTCAATTATACTTGGATTCTCAGCTGCTACAGGAAATTTTTATGAGGTTCATAGTCTGCATTCTTGGTCATTTAGTTCAAGTTTAGAAAGTGATGAGAGTGTCACAAGTCCGATAGAACCAACCAACGATCCTAAGTCTGAAAAAGGAAGCAAGATAGGAATGTTGGTGGGGCTAGGAATTGGTATAGGGGTGATTGTGAGTTTGTCAGGGATAGTTTATACTTTATTGTGGAAAAGGACTAGTAGGCAAAAGGAAGAGTTGTCTTTTGATCTCAACATGGATAATGAATTCCAAAAGGGCACTGGACCTAAGAGGTTCTGCTACAATGAACTGGTAAGTGCAACAAATAAATTTTCAGAGTCAGAGAAGCTTGGACAAGGTGGTTTTGGTGGTGTTTATAAAGGTTACATGAAAGACTTAAACTCCCATGTCGCCATAAAAAGGGTATCAAGAGGGTCTAGTCAAGGTATAAAGGAATATGCAACTGAAGTGAAGATCATTAGCCAATTGAGACATAGAAATTTGTGTAATGTTTACAATCTCTCCTGTTTGAGGATCAAGTCTTGTGACTCCTACTTAACTGCTATAAATACACCAAAACCTCAAGTCCTCAACGTGCGTCTTAAGACAAAAGCAAACCTTAATTGA 1350 0.3844 MHHYTSTFIFYYAMGTIFFLHITPLAIPLSFDYPNFNYGEVNVEGDAYFLKQGIQITVNTMDQNNNYSVGRVTSHKHMRLWDKNSSKLADFKTEFSFVVYADHKSKHGDGLAFFLADPNLPLLEDIEEGGGLGLVDGNQVLNSTQHSFVAVEFDTFQNPWDPSGLHIGMNFNSMRSKITKPVFMDIWSRKIYNCSIEYSSSTLNLSVLFSGYKHDRIAKTYISYKVDLRDYLPESIILGFSAATGNFYEVHSLHSWSFSSSLESDESVTSPIEPTNDPKSEKGSKIGMLVGLGIGIGVIVSLSGIVYTLLWKRTSRQKEELSFDLNMDNEFQKGTGPKRFCYNELVSATNKFSESEKLGQGGFGGVYKGYMKDLNSHVAIKRVSRGSSQGIKEYATEVKIISQLRHRNLCNVYNLSCLRIKSCDSYLTAINTPKPQVLNVRLKTKANLN* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2820 449 Pfam Legume lectin domain 29 267 IPR001220 GO:0030246
Dod04g2820 449 PANTHER - 17 412 - -
Dod04g2820 449 Gene3D Phosphorylase Kinase; domain 1 337 423 - -
Dod04g2820 449 Pfam Protein kinase domain 353 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2820 449 ProSitePatterns Legume lectins beta-chain signature. 149 155 IPR019825 -
Dod04g2820 449 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 265 IPR013320 -
Dod04g2820 449 SUPERFAMILY Protein kinase-like (PK-like) 333 416 IPR011009 -
Dod04g2820 449 ProSiteProfiles Protein kinase domain profile. 352 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2820 449 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE 17 412 - -
Dod04g2820 449 CDD lectin_legume_LecRK_Arcelin_ConA 29 249 IPR001220 GO:0030246
Dod04g2820 449 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Dod04g2820 449 Gene3D - 28 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2820 Dod-Chr4 52221374 52223644 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2820 19 412 Receptor kinase-like Gene Family AT5G10530 35.294 1.64e-61 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dod04g2820 Lectin_legB 1.4e-60 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2820 - - gmx:100780181 466.463