Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2805 ATGGAGGATGATTGGCGCTGGGAGCAGAACACACTCATCAATGAGCTAATTCAGGGGATGGAGGTAGCAAGAAAGTTGAAGGCAGACCTGAGGACACCATACTCAGCTGACACAAGGGATTTAATGGTGCAGAGTATATTATCTTCTTACGAAAAGGCTCTACTAATTCTAAGATGGAATGCATCAACTTCCAGGTCGCAGAGCATGAATCAAGCAACAGCAACTTTCTTACCAGAGTCTCCAATATCTGTCAGCGGAGGAAGTCCTCTGATGGAGGATGTTGATGGGGCCAACAAGGATCATCAGGAGGCCAAACACGATTCAAAGAAAAGAAAGATAATGCCCAAATGGGTGGATCAAGTACGAGTGAGCTCTGAGACCGGCCTTGAAGGACCGCATGAAGATGGCTACAATTGGAGAAAATATGGACAGAAAGATATCCTCGGTGCCAAATATCCCAGAAGTTATTATAGGTGCACCTTCCGCAACACTCAGGACTGCTGGGCCACTAAGCAAGTACAGAGATCAGATGAAGATCCCTCTATATTTGACATAACTTACAAAGGAAATCATACCTGTTCTCAGGGAAACAATGCTGTTCCGCCAGCAAAGTCACCAAGCAAACATGAGAAACCACAGTGTCGTCATGATGATATTCACCATGCACAGCCATCATCACAACAAGGCCTTACAAATTGCAGAAACATCGTGACAGTCAATACCGATAAGCTGGGAAAAGAAGAAATGGAATACCCTTTCACTTTCCCTTCAACTTCATTTGGATACGTGACACAAGAAAACCACAGCTTGTTTCCTTCTGGCCTAGAGAATGATTCCTTCTTGAGCAGCCTTTTCCAAACACACTTATCGACTCCAAACATACATGAATCTTCGAACTATCTCCGATCTCCTTCTTTCCAAATGAATGACTTTGATGTGATCTATAACCAGCCCGTTTCAGAATCTGATATTCCTGATATCATTTCCACCAACACATCAGCCACCAATTCGCCAATTCCCGATTTCAATTTCTCAATTGATCCGGTGAAGATTGACCCGAATTTCCCTTTCAATACCCCAGGACTTTTCTCCTAA 1095 0.4365 MEDDWRWEQNTLINELIQGMEVARKLKADLRTPYSADTRDLMVQSILSSYEKALLILRWNASTSRSQSMNQATATFLPESPISVSGGSPLMEDVDGANKDHQEAKHDSKKRKIMPKWVDQVRVSSETGLEGPHEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQDCWATKQVQRSDEDPSIFDITYKGNHTCSQGNNAVPPAKSPSKHEKPQCRHDDIHHAQPSSQQGLTNCRNIVTVNTDKLGKEEMEYPFTFPSTSFGYVTQENHSLFPSGLENDSFLSSLFQTHLSTPNIHESSNYLRSPSFQMNDFDVIYNQPVSESDIPDIISTNTSATNSPIPDFNFSIDPVKIDPNFPFNTPGLFS* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2805 364 MobiDBLite consensus disorder prediction 193 230 - -
Dod04g2805 364 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 360 IPR044810 GO:0003700
Dod04g2805 364 SUPERFAMILY WRKY DNA-binding domain 132 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod04g2805 364 MobiDBLite consensus disorder prediction 208 222 - -
Dod04g2805 364 ProSiteProfiles WRKY domain profile. 128 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g2805 364 Pfam WRKY DNA -binding domain 134 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g2805 364 Gene3D WRKY domain 119 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod04g2805 364 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 360 - -
Dod04g2805 364 SMART WRKY_cls 133 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2805 Dod-Chr4 52077146 52078467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2805 7 266 WRKY Transcription Factor Family AT4G23810 43.056 6.11e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod04g2805 WRKY 8.7e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2805 - - gmx:100815760 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2805 04 52077146 52078467 Dod04g2805 04 52077146 52078467 ECH
Dod04g2805 04 52077146 52078467 Dod07g2054 07 51420986 51424483 ECH
Dod02g1159 02 14391098 14392473 Dod04g2805 04 52077146 52078467 PCT