Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2789 ATGGAATTCCTACCCTTTTTCTTCTTTTCTGTTTACCTGTTGGTTCCCACTATCCTCTGGCAAGGAAATGCAGAACCTGTTGAAGATAAGCAAACTTTGCTTGACTTTGTGAACAAGTTCCCTCCTTCGAGGACTCTGAATTGGGATGGGAGCTCCTCCCTGTGTGCCAATTGGACAGGAGTCGCTTGCAATGAAGATGAGTCCCGAGTCATCGCCATCCGCTTGCCGGGGGTTGGATTTCATGGCACCATTCCACCTGACACAATTAGCCGCCTCTCGGCACTGCAGATTTTGAGCCTCAGATCCAACATCATAACTGGCCAGTTCCCTTCTGATTTTTCTAATCTCAAGAACTTGACCTTGCTGTATCTTCAGTTCAACAATTTCTCGGGTCCGTTGCCTGATTTCTCAGTTTGGAAGAATCTCACTATTGTCAATTTGTCCAATAACCGTTTCAATGCCAGCATTCCGGCTTCCCTTTCCAATTTGACCGAGCTTGCTGGTTTGAACCTTGCAAACAACTCACTTTCTGGTGAAATTCCTGATCTCCAGTTGCCTAGATTGCAGCTGCTGAATCTGTCTAACAACAATTTGCACGGCAGCGTGCCTAAGTCCCTCCAGAGCTTTCCCAAGTCAGCATTCCTTGGAAACAACATTTCTATTGGAAGCTCTCCCGCTGTTTCGCCGGCCACTCCACCGGTTTATGAGCCTACTATGAGATCTAAGAAGCATGGAAGGCTCAGCGAAACAGCGCTGCTGGGAATTACTATTGCCGGTGGTGTTCTAGGCCTTGTGGCATTCATTTTCTTGATGTTTGTGTGCTGCTCGAGAAGGACGGGTGAAGATGATGATGTCTTCAATGGGAAGATGCAGAAGGGAGAAATGTCTCCGGAGAAAGCAGTCTCGAGGAACCAGGATGCAAATAATAAACTGGTTTTCTTTGAGGGATGTAATTATGCCTTTGATTTGGAGGATCTGTTGAGGGCTTCTGCTGAGGTACTGGGAAAGGGAACATTTGGCACTGCATACAAGGCAATACTGGAGGATGCAACCACAGTTGTTGTGAAGAGGTTAAAGGAGGTGGCAGTTGGAAAGAAGGATTTTGAGCAACACATGGAAATAGTAGGAAATCTTAAACATGCGAATGTGGTTGAGCTGAAGGCATATTACTATTCCAAAGATGAGAAACTGATGGTATATGATCACTACAGTCAGGGGAGCGTCTCTTCAATGTTGCATGGTAGAAGAGGAGAGGACAGGGTGGCTTTAGATTGGGATACTCGGCTGAAAATAGCTTTAGGTGCTGCAAGAGGCATTGCTCGAATCCATGCTGAGAATGGAGGTAAGCTTGTACATGGCAACATCAAATCCTCAAATATCTTTCTCAATGCTAAACAGTATGGTTGTGTGTCTGACCTTGGCCTTGCAACCATAATGAGCTCACTTGCCTTGCCCATCTCACGCGCTGCTGGTTACCGAGCACCTGAAGTTACAGACACCAGGAAAGCAGCACAACCTTCAGATGTTTACAGCTTTGGCGTGGTGTTACTAGAGCTTCTGACTGGGAAATCCCCTATCCACACAACTGGTGGGGATGAGATTATCCACCTGGTGAGATGGGTTCATTCGGTTGTGCGAGAGGAGTGGACAGCTGAAGTGTTTGACTTAGAGCTGATGAGATATCCAAACATAGAGGAAGAGATGGTGGAAATGCTACAGATAGCCATGTCATGCGTGGTAAGGATGCCTGATCAGCGGCCTAAGATGTCTGAACTCGTGAAGATGATCGAAACTGTGAGGCAGATTGATACAGAGACTCAGCCATCATCTGACAACCAAGCAGAACACAAGTTACCTCAACGTGACAATGATAACTCCCCTTCCACTCCCTCCCCCTTCTCAAAAGGAAGTGAATGA 1917 0.4664 MEFLPFFFFSVYLLVPTILWQGNAEPVEDKQTLLDFVNKFPPSRTLNWDGSSSLCANWTGVACNEDESRVIAIRLPGVGFHGTIPPDTISRLSALQILSLRSNIITGQFPSDFSNLKNLTLLYLQFNNFSGPLPDFSVWKNLTIVNLSNNRFNASIPASLSNLTELAGLNLANNSLSGEIPDLQLPRLQLLNLSNNNLHGSVPKSLQSFPKSAFLGNNISIGSSPAVSPATPPVYEPTMRSKKHGRLSETALLGITIAGGVLGLVAFIFLMFVCCSRRTGEDDDVFNGKMQKGEMSPEKAVSRNQDANNKLVFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKEVAVGKKDFEQHMEIVGNLKHANVVELKAYYYSKDEKLMVYDHYSQGSVSSMLHGRRGEDRVALDWDTRLKIALGAARGIARIHAENGGKLVHGNIKSSNIFLNAKQYGCVSDLGLATIMSSLALPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSELVKMIETVRQIDTETQPSSDNQAEHKLPQRDNDNSPSTPSPFSKGSE* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2789 638 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Dod04g2789 638 PANTHER PROTEIN, PUTATIVE-RELATED 23 610 - -
Dod04g2789 638 Gene3D Ribonuclease Inhibitor 138 228 IPR032675 -
Dod04g2789 638 ProSitePatterns Protein kinases ATP-binding region signature. 334 365 IPR017441 GO:0005524
Dod04g2789 638 PANTHER OS05G0588300 PROTEIN 23 610 - -
Dod04g2789 638 MobiDBLite consensus disorder prediction 601 638 - -
Dod04g2789 638 ProSiteProfiles Protein kinase domain profile. 328 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2789 638 SUPERFAMILY Protein kinase-like (PK-like) 332 597 IPR011009 -
Dod04g2789 638 Gene3D Transferase(Phosphotransferase) domain 1 404 625 - -
Dod04g2789 638 SUPERFAMILY L domain-like 40 211 - -
Dod04g2789 638 Pfam Leucine rich repeat 83 129 IPR001611 GO:0005515
Dod04g2789 638 Pfam Protein kinase domain 331 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2789 638 MobiDBLite consensus disorder prediction 623 638 - -
Dod04g2789 638 Gene3D Ribonuclease Inhibitor 28 137 IPR032675 -
Dod04g2789 638 Gene3D Phosphorylase Kinase; domain 1 293 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2789 Dod-Chr4 51964135 51968484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2789 1 631 Receptor kinase-like Gene Family AT4G23740 63.863 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod04g2789 Pkinase 1.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2789 - - gmx:100804799 1032.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2789 04 51964135 51968484 Dod04g2789 04 51964135 51968484 ECH