Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2765 ATGATCATTCCAGAGAAGAACCGCAAAGAGATATGCAAATACCTTTTCCAAGAGGGAGTTTGCTATGCAAAGAAGGACTTCAATTTGGCAAAGCATCCCGACATTGATGTGCCAAATCTACAGGTGATTAAGCTGATGCAAAGTTTCAAGTCAAAGGAGTATGTTCGTGAGACCTTTGCTTGGATGCACTATTACTGGTTCCTCACCAATGATGGCATTGAGCACCTCAGAACTTACCTCAATCTTCCTTCAGAAATTGTCCCTGCAACTCTTAAGAAACAAGCCAAGCCCGCAGGTAGACCCTTCGGTGGTCCACCTGGTGATCGCCCTAGGGGTCCACCACGCTTTGAAGGAGAACGTAGGTTCGGTGACCGTGATGGATACCGCGGAGGTCCCCGAGGTCCTGGTGGTGATTTTGGAGGAGACAAAGGAGGAGCACCTGCAGACTACAGGCCCTCTTTCGGGGGTTCTGGTGGAAGACCTGGCTTTGGGCGTGGTTCTGGTGGTTATGGGGCACCGACTAGCTCAAATCTTTCCTAA 540 0.4981 MIIPEKNRKEICKYLFQEGVCYAKKDFNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEHLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGSGGRPGFGRGSGGYGAPTSSNLS* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2765 179 PANTHER 40S RIBOSOMAL PROTEIN S10 1 178 IPR037447 -
Dod04g2765 179 MobiDBLite consensus disorder prediction 92 179 - -
Dod04g2765 179 Gene3D - 1 104 IPR036388 -
Dod04g2765 179 MobiDBLite consensus disorder prediction 112 128 - -
Dod04g2765 179 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 178 - -
Dod04g2765 179 Pfam Plectin/S10 domain 3 94 IPR005326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2765 Dod-Chr4 51595108 51598299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2765 1 178 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 77.654 9.39e-76 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2765 K02947 K09422 gmx:100500445 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2765 04 51595108 51598299 Dod04g2765 04 51595108 51598299 ECH
Dod02g1120 02 13909109 13910699 Dod04g2765 04 51595108 51598299 PCT