Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2760 ATGGCTCGACAACTGTGTGAAGACAAATCGAGGGACATGGCTAATTCATCATCGGGTGGATTCTGCTACTCGGATAACCCAACGATTCAACCCCATCTGGTGAACCGGATCCAAGGCTTTGTCTCCGACCCAGAGATGTTCAACCTCACCACTGGCATGGACATGATAGGGTTCTCCAAGAATCTTCATCAGCAACAGCAGCACAGTGACACAAATAACGGTGCCATGTGGAAGAGTTTGTTCGGCAAACCTGGTCAACACGCTGGTCCTTCCTCTTCCAAGACCATGAACGAGTCTTCTTCCACCAATTTCTATCACGAATATAATAATAATAAACAAGACTTCACATCAGGGATTTCTGAGACAAGTAGCGAGAATCTCATCGTTGGTACTGCTCATGATTCTTCTTCTGCCCCGTGGCAAGAGAACAGGTTAATCGTTGATGATTCCTCCCTAAGGTGCGTGTTCCCTTGTGAAGGTAACGAAAGGCCGAGTCAAGGCCTTTCACTCTCTCTCAGTTCAACCAATCCTTCGAGTATTGGGTTGCAATCTTTTGAGCTAAGACAAACAAGCAGCCATCATCAGCAACAACATCAAATGTTGCAAGATCAAGGGTATTTGAATCCCAAAGCTGCGAATCTTTATCAAGGGCATTTCTTGCTCAAGAACTCCAAGTTCTTGGTACCCGGTCAGGAGCTTCTGAACGAGTTTTGTAGCCTGGGAACCAAGCAAAGTGAAGCGATGAAGCAAAAGCCTCAGAAGAGCAAGCAGTGGGAAGAGGATAACGGTAGCAGCAGTTCCTCATCAAAGAAGCATCCTCTCAGCTCTCTGGAATTCGTGGAATTGCAGAAGAGAAAGACAAAGCTGCTTGCGATGCTAGAAGAGGTGGACAGAAGGTACAAGCACTACTGTAATCAGATGAGGGCGGTGGTGTCTTCATTTGAGGCGGTGGCGGGCAATGGCGCAGCCACGGTGTACTCGGCGCTGGCGTTGAAGGCGATGTCGAGGCATTTCAGGTGTTTGAAGGATGGGATAATGGATCAGATTCAGGTGACAAGGAAAGCCATGGGAGAGAAAGACCCAGTTGCACCAGGCACCACAAGAGGGGAAACGCCAAGGCTCAGAGTCATTGACCAAGCATTGAGACAACAAAGGGCGTTCCAGCAAATGAGCATGATGGAAACCCATCCATGGAGACCCCAACGTGGCCTTCCCGAACGTTCCGTTTCCGTTCTCAGGGCTTGGCTTTTCGAGCACTTTCTCCACCCGTACCCAAGCGATGTTGATAAACATATTTTAGCCCGCCAAACTGGTCTCTCTAGAAGCCAGGTTTCAAATTGGTTTATTAATGCAAGGGTGAGGCTATGGAAGCCAATGGTGGAGGAAATGTACATGGAAGAAGCGAGGGAGAATGAAAACATGGCATCCTCGGAGGGAGGCACCAACCCGGACGATGTTCAAAACCCATCCCCAAGGCCCGATGATCAGAAGCCAACGCAGGCTCGACTCCTTAGAATTGACTCAGAGTGCGTGTCCTCCATCATCAACAACCCTGCTGACCACAAAGACGACCCAAAGATCAGCACCAAAGCCATCCACCACATGAATAATCCTCATGAACAATGCTTAGGGCGAGTCGCGGACACGTTTGGATCGGTGGAGATTGATTTTTCATCTTATGATCACCACTCCACCGGCATGGTCCCTGCTTACAGTAATACTAGCAATGATCATCGGAACAATGGCAATCCCAGTCAGGGTTTCAATGGGGGTAGTGGTGGTGCGGTCTCGTTGACGCTAGGGTTGCAGCAACACGGTGGAACTGGTGGTGTGAGCTTGGCGTTCCCTCCAGCGACTCATCATCAGGGCTCGATGTTCTACTCGAGGGAGCAGATTGAAGAGTGTCAACCGGTTCAGTACTCTCTTTTGGATGGCGAAGGACAAACCATGCCGTACAGGAATTTGATGGGGACACAGTTGCTTCATGACTTCGCAGGATAG 2001 0.4938 MARQLCEDKSRDMANSSSGGFCYSDNPTIQPHLVNRIQGFVSDPEMFNLTTGMDMIGFSKNLHQQQQHSDTNNGAMWKSLFGKPGQHAGPSSSKTMNESSSTNFYHEYNNNKQDFTSGISETSSENLIVGTAHDSSSAPWQENRLIVDDSSLRCVFPCEGNERPSQGLSLSLSSTNPSSIGLQSFELRQTSSHHQQQHQMLQDQGYLNPKAANLYQGHFLLKNSKFLVPGQELLNEFCSLGTKQSEAMKQKPQKSKQWEEDNGSSSSSSKKHPLSSLEFVELQKRKTKLLAMLEEVDRRYKHYCNQMRAVVSSFEAVAGNGAATVYSALALKAMSRHFRCLKDGIMDQIQVTRKAMGEKDPVAPGTTRGETPRLRVIDQALRQQRAFQQMSMMETHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYMEEARENENMASSEGGTNPDDVQNPSPRPDDQKPTQARLLRIDSECVSSIINNPADHKDDPKISTKAIHHMNNPHEQCLGRVADTFGSVEIDFSSYDHHSTGMVPAYSNTSNDHRNNGNPSQGFNGGSGGAVSLTLGLQQHGGTGGVSLAFPPATHHQGSMFYSREQIEECQPVQYSLLDGEGQTMPYRNLMGTQLLHDFAG* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2760 666 MobiDBLite consensus disorder prediction 469 499 - -
Dod04g2760 666 MobiDBLite consensus disorder prediction 572 596 - -
Dod04g2760 666 MobiDBLite consensus disorder prediction 259 274 - -
Dod04g2760 666 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 617 - -
Dod04g2760 666 Pfam Homeobox KN domain 415 454 IPR008422 GO:0003677|GO:0006355
Dod04g2760 666 Gene3D - 401 463 - -
Dod04g2760 666 MobiDBLite consensus disorder prediction 474 495 - -
Dod04g2760 666 SMART prehox3 215 347 IPR006563 -
Dod04g2760 666 SMART HOX_1 398 462 IPR001356 GO:0003677
Dod04g2760 666 SUPERFAMILY Homeodomain-like 399 465 IPR009057 -
Dod04g2760 666 CDD homeodomain 398 459 IPR001356 GO:0003677
Dod04g2760 666 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 1 617 - -
Dod04g2760 666 MobiDBLite consensus disorder prediction 245 274 - -
Dod04g2760 666 ProSiteProfiles 'Homeobox' domain profile. 395 458 IPR001356 GO:0003677
Dod04g2760 666 Pfam Associated with HOX 221 345 IPR006563 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2760 Dod-Chr4 51545731 51551343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2760 142 665 Homeobox Transcription Factor Family AT5G41410 48.962 6.69e-147 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Dod04g2760 POX 2.1e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2760 - - qsu:112025693 839.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2760 04 51545731 51551343 Dod04g2760 04 51545731 51551343 ECH
Dod02g1113 02 13846447 13849441 Dod04g2760 04 51545731 51551343 PCT