Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2757 ATGGGGTTCCCAGTGGGATACACGGAGCTTCTCTTCCCAAAGCTGATTCTCCACGTCCTCTCCGTCTTGGGCTTCATCAGGAGACTAATCTGCACCCTCTTCCGCTACCTGGGCCTCAACGACTTCCTCCCCGAGCCCGACATTGCCTGGCCCGATGACCCCGCTGCCCGCATGCCCCAATTCCAGTCTGTGTCGGACCTCCTCATCCGCGAAATCCTTCCGGTTGTGAAGTTCTCGGAGCTGGTGGACCCGCCCGAAAGCTGCGCCGTGTGCCTCGCCGACTTCGACGACGACGACGACATCCGACGGCTTGCCAACTGCCCACACGTATTCCACCGAGGTTGCCTGGACCGTTGGATGGGGTACGACCAGAGAACGTGCCCCTTGTGCCGAACACCCTTCATTCCACATGATTTGCAAGGCGCATTCAATGAGATCCTCTGGGCTGCTTCTGGTATCCCTGAAGAATTTCACCCTCATCATCTTCCTTCTGTGTAA 498 0.5803 MGFPVGYTELLFPKLILHVLSVLGFIRRLICTLFRYLGLNDFLPEPDIAWPDDPAARMPQFQSVSDLLIREILPVVKFSELVDPPESCAVCLADFDDDDDIRRLANCPHVFHRGCLDRWMGYDQRTCPLCRTPFIPHDLQGAFNEILWAASGIPEEFHPHHLPSV* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2757 165 ProSiteProfiles Zinc finger RING-type profile. 88 131 IPR001841 -
Dod04g2757 165 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 134 IPR013083 -
Dod04g2757 165 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 154 - -
Dod04g2757 165 PANTHER - 1 154 - -
Dod04g2757 165 SMART ring_2 88 130 IPR001841 -
Dod04g2757 165 Pfam Ring finger domain 87 131 IPR001841 -
Dod04g2757 165 SUPERFAMILY RING/U-box 68 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2757 Dod-Chr4 51496582 51497540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2757 1 152 C3H Transcription Factor Family AT1G63840 57.692 2.60e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2757 K16281 - jre:109014495 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2757 04 51496582 51497540 Dod04g2757 04 51496582 51497540 ECH