Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2755 ATGTTGTCCTCTGATGGAGGTGGAGACCTTGCGTTTCTCTCTGACCCTTTCCCTTTGTTCACAACCACTGATGTGGCTCATCACAATTCAAGCAACCAAAACCAAACCCCGTTTATTGATGAACCTCTTCTTTCTAGTTCTGCTGACCCTTTTTCTACTTGTTTCTTCTCTTTCTCTCCTCCAAGCACCCACTTGGAAAACCTGAGCCTTCAGGGGAACCGTGTGCCGAGTTTGGAGAGTGAATTTGCGAGTTTCTCATCAGCTTTTGATGGGTCGGAAGTAGTGAAGAGTGAGGAGTGCCAAATTGGTGTTGAATTTGATTATGCCTACAACAACCAGCAGTTTCTTCCACACAGTTATAGTGGTGTTGAAAATGTTTCAAAGTACATGCAGAGGAGCTTCAGCAGCAACTCCTTTGAAGGGAAAAAACCAGGGAATTTCCTGTTCCAAAATCACTGCGATACTCCAAATATGGATTCCCCAAATTTTCAAGGCCATGCCATGAGTTCCCCTGAACACAGTGCCTTGGCTGGACAAATGAGGAGAGTGTGCAGCACTGGTGATTTGCAGAACATGAAAGCAAATCATCACACGTCTCAAACGGAGGGGTCGTTGTTGGAGGAACCAAACTTCAAAGTGGGGCGTTATAGTGCTGAAGAAAGGAAAGAAAGAATTTCTAAATATAGAGCAAAGAGAAGCCAGAGGAACTTCAACAAAACCATTAAGTACGCATGCCGAAAAACACTAGCCGACAATCGACCACGTATACGTGGCAGATTCGCACGTAACGACGAGGCCAGTGAGATTCCCAATCCCAAGGCTCCATGTTCAATCCGAGATGATGAAGTAGATTTCTGGATTGAAGGGTTGCAATTGCATGAAGAGCAAGAGGATATAACACTGGGAGCAGAACAATATATGAACGATTACGGAGCCACTCAGTTTCAATACTGTCGATTTTGA 963 0.4465 MLSSDGGGDLAFLSDPFPLFTTTDVAHHNSSNQNQTPFIDEPLLSSSADPFSTCFFSFSPPSTHLENLSLQGNRVPSLESEFASFSSAFDGSEVVKSEECQIGVEFDYAYNNQQFLPHSYSGVENVSKYMQRSFSSNSFEGKKPGNFLFQNHCDTPNMDSPNFQGHAMSSPEHSALAGQMRRVCSTGDLQNMKANHHTSQTEGSLLEEPNFKVGRYSAEERKERISKYRAKRSQRNFNKTIKYACRKTLADNRPRIRGRFARNDEASEIPNPKAPCSIRDDEVDFWIEGLQLHEEQEDITLGAEQYMNDYGATQFQYCRF* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2755 320 PANTHER CCT MOTIF FAMILY PROTEIN 7 317 - -
Dod04g2755 320 ProSiteProfiles CCT domain profile. 221 263 IPR010402 GO:0005515
Dod04g2755 320 Pfam CCT motif 221 263 IPR010402 GO:0005515
Dod04g2755 320 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 7 317 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2755 Dod-Chr4 51474318 51475806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2755 217 268 C2C2-CO-like Transcription Factor Family AT5G24930 50.000 8.62e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod04g2755 CCT 8.2e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2755 - - adu:107479916 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2755 04 51474318 51475806 Dod04g2755 04 51474318 51475806 ECH
Dod02g1108 02 13762305 13764421 Dod04g2755 04 51474318 51475806 PCT