Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2753 ATGGGCGGTTGTTGCTGCTGCTGTTCTTCCAAAGAGACTGAATTGAGCGCTCAACCTGCAATTGCATACTACTATTACCCAAGAGCATCAGAGGGGCATGTTCCACTCTCATCTCACCAGGGTGCTGCCCCTGCTTTCTCCGGGCGGCTCTTAGTCGATACGAATCTAGATACTTCAAGCCCTGATACTTATAGACCACCTCCTGCTCCAATCCCTTTCAATGTTACGTCGGGTGCCATTGAAACTCCTCCCATGGCTCCAGAAATCATTGGTGACAAGAATAGTGCATCCGTGCATTCTACAAATTCTAATTCAATTCAAGAACCAGTTGCAGGAGACAATCTTGGGGCCGCAGCTAAGGAAGAATTGAAAGAATCAGAAGGCAAAGTTCAGACGGATTTAGAACTTGACTCAGCTAAGGATTCTGAAATTGAACTCCCAAAGTTGGGAGAAACAATAAATTTAGCAGAAGAGGAGGAATCATGCCCAATTTGTTTAGAAGAGTATGACGCAGAGAATCCAAAACTCAACACAGAATGTGACCATCATTTTCACCTTGCATGTATTCTGGAATGGATGGAAAGAAGTGAAACTTGCCCTGTGTGTGATCAGGATATGGTTTTCAACCCTCCCATTGGATAA 642 0.4455 MGGCCCCCSSKETELSAQPAIAYYYYPRASEGHVPLSSHQGAAPAFSGRLLVDTNLDTSSPDTYRPPPAPIPFNVTSGAIETPPMAPEIIGDKNSASVHSTNSNSIQEPVAGDNLGAAAKEELKESEGKVQTDLELDSAKDSEIELPKLGETINLAEEEESCPICLEEYDAENPKLNTECDHHFHLACILEWMERSETCPVCDQDMVFNPPIG* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2753 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 208 IPR013083 -
Dod04g2753 213 SUPERFAMILY RING/U-box 156 209 - -
Dod04g2753 213 Pfam Ring finger domain 161 202 IPR001841 -
Dod04g2753 213 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 212 - -
Dod04g2753 213 ProSiteProfiles Zinc finger RING-type profile. 162 203 IPR001841 -
Dod04g2753 213 SMART ring_2 162 202 IPR001841 -
Dod04g2753 213 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2753 Dod-Chr4 51443476 51446170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2753 1 209 C3H Transcription Factor Family AT5G41350 54.460 2.07e-71 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2753 - - gmx:100816369 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2753 04 51443476 51446170 Dod04g2753 04 51443476 51446170 ECH