Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2752 ATGTTCATGGCAGGATGGTCAAGTTTCACAAATGGGTCGTCCTTAGATTGCCTTGAAGTTGAACATTTTGATGCATGTGATGGTGAGGATTGTTGCCTTGTAAAAGATCATGCTGATAATACTGACTATGATAAAGTTAAAAGCTTGTTTTATAAACTTTTCCCGGTTTACCTAAAGGAAAATTGTTCTAAAGGCGTTGTTCGGCCTGTGCCGGTCTTGCTCGGCGATGGCCAATTTCTGGATTTGTACAAACTGTTCTCCCTTGTCAAGGAGAGGGGCGGCTATGCTGTGGTGTCGAAAAAAGGATTGTGGGGTTACGTGACACAGGAATTGGGTTTGAAACATCGAGTTTTGGCCTCGGTGAAATTAGTTTATGACAAGTATCTGAATGATTTTGAAGAATGGCTCAGGAAGGCTTTTGAAGAGAAGAATTTCAGAAACGGAAATAAAGGGTGTGACTGGGGTTTTAAGTCATTGCCATTAGAGCTAGAAAAAGAGTTTAGAGGCTTGTTATGTCTAAATCTAAAGGAGAAAGATGATGAACTTGTCCAGTTGGAAGCAAATAGAATAAGAAAGTATATTGATTTGGTTAACCACAAGGGAGAGAAAAATTTATTGGATGCCAAGAATCAGAACACATGTGAGGATGTCCAAAATGTTAGTTGTGATGATGACAAAAAAGTTTGTAATGGTGTTAAGGATGACCTTCATACCTTGGATGCAGAGGCTGCTAATGGAGTTAAGGATGACCTTCCCCACTTAGATGCAGAAGCTTCTGATGGTGTTAATGATGATCTACGCACATTGGATGCAGTGGTTGCTAATGGTGTTAAGGATGACCCTGCCTCCTTGGATGCAGAGGTTGCTGGGAATGAATTTGGCTCTCGCAAGCGCAAACGGGAACCATTATCTGGAATGCTGAACTGGATTAAGCGAATTGCGAAGCATCCTCTTGTTCCGTTAAAGCAACCAATACCAAAACCTTCACAGTGGAAGGAGTATAAAGGCCAGGATTTCTTCATGCAGTTACTAAGGGCACGAGAGGTTCGATTGCTGAGACCGATTGTACAACCAAACAGTGAACCATCTTCTTCACAGAAGCTGAAGATGCATCCTGCTATGTACGACGATCATGTTGCACCTCGTCACCATTCTACTGTGAAATTGAGATGTAGTGAAAGGGTGCCTACATCTGTTAAATCTCGCTTGTGCTCTTGTTGCAATTCATGTCATGCCAATGGAAACAGATTGACAAGTTCAGTCACCACAGAGGCCCAAAGATGTCCCCGGGATAAGACGACCACCACTGAAGATCCATTGATCGCAAAAACAACAGCTGATCAGTCTGGGGATGAATTTCTTGAAAAGCAAGTTTCTATAGGTCCTCTCTTTCAAGCGGAAGTCCCAGAATGGACTGGTGATGTTTCTGAGAGTGACTCTAAATGGTTAGGAACTCACGTGTGGCCTCCGAAACATGACTTAAACCCTCCTACTGAAACAGACCTTGTTTGGAGAGGAAGACGAGAGAAGTGTAGCTGCTCTTTTAAAGGTTCGGTTGAGTGTGTCAGATTTCATATTGCTGAAAATAGGATGAAATTGAGGCATGAATTGGGTTCTGCATTTTACCATTGGGGATTTGATCGTATGGGTGAAGAAATTTCCCTTCAATGGACAACGGAAGAGGAAAAGAGATTTAAGAATTTTATGATGTTAAATATTCCCTCCCAGAATGAGTGTTTTTGGAGCAACTCATCCAAATACTTTCCGGAGAAGACAAGAAAAAGCTTGGTGAGCTATTACTTCAATGTATATCTCATCCAACTAAGAAGCTATCAGAATCGTGTGACTCCCAAGAGCGTTGATAGCGATGATGATGAAGCAGAATTTGGATCTTTTAGTGATGGTTTCGGAATGCATGCTCTCAAAGGTCCGGGTTCTAGTGTCCTGGAGTGTTCAGAGAACAAGCAGTGCACTGATTTGGAGTGA 1986 0.4215 MFMAGWSSFTNGSSLDCLEVEHFDACDGEDCCLVKDHADNTDYDKVKSLFYKLFPVYLKENCSKGVVRPVPVLLGDGQFLDLYKLFSLVKERGGYAVVSKKGLWGYVTQELGLKHRVLASVKLVYDKYLNDFEEWLRKAFEEKNFRNGNKGCDWGFKSLPLELEKEFRGLLCLNLKEKDDELVQLEANRIRKYIDLVNHKGEKNLLDAKNQNTCEDVQNVSCDDDKKVCNGVKDDLHTLDAEAANGVKDDLPHLDAEASDGVNDDLRTLDAVVANGVKDDPASLDAEVAGNEFGSRKRKREPLSGMLNWIKRIAKHPLVPLKQPIPKPSQWKEYKGQDFFMQLLRAREVRLLRPIVQPNSEPSSSQKLKMHPAMYDDHVAPRHHSTVKLRCSERVPTSVKSRLCSCCNSCHANGNRLTSSVTTEAQRCPRDKTTTTEDPLIAKTTADQSGDEFLEKQVSIGPLFQAEVPEWTGDVSESDSKWLGTHVWPPKHDLNPPTETDLVWRGRREKCSCSFKGSVECVRFHIAENRMKLRHELGSAFYHWGFDRMGEEISLQWTTEEEKRFKNFMMLNIPSQNECFWSNSSKYFPEKTRKSLVSYYFNVYLIQLRSYQNRVTPKSVDSDDDEAEFGSFSDGFGMHALKGPGSSVLECSENKQCTDLE* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2752 661 ProSiteProfiles ARID domain profile. 44 137 IPR001606 GO:0003677
Dod04g2752 661 SMART ELM2_2 458 508 IPR000949 -
Dod04g2752 661 ProSiteProfiles ELM2 domain profile. 456 502 IPR000949 -
Dod04g2752 661 SUPERFAMILY ARID-like 49 138 IPR036431 GO:0003677
Dod04g2752 661 SMART bright_3 45 138 IPR001606 GO:0003677
Dod04g2752 661 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 3 661 - -
Dod04g2752 661 SMART ARID_2 41 133 - -
Dod04g2752 661 CDD ARID 50 133 - -
Dod04g2752 661 Pfam ARID/BRIGHT DNA binding domain 57 133 IPR001606 GO:0003677
Dod04g2752 661 Gene3D - 35 147 IPR036431 GO:0003677
Dod04g2752 661 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 3 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2752 Dod-Chr4 51431406 51436075 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Dod04g2752 ARID 3.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2752 - - gmx:100819320 807.749