Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2738 ATGGTGGCAGAGAACATGAAGAAACAGCTTGCTTTGGCTGCGAGAAGCATCCAGTGGAGCTATGCGATATTCTGGTCTGGTTCAGCTACACAGCCAGGGGTGTTGAGCTGGGGGGAAGGATATTACAATGGAGACATAAAGACAAGGAAAACAAATCAAGCAGTGGAACTGAATTCTGATCAAATAGGGCTGCAGAGGAGTGAGCAGCTGCGAGAGCTGTTCAAGTCCCTCAAAACTGCAGAAGCCAGCCCACAAACAAAAAGGCCTTCAGCTGCACTCTCTCCTGAAGATCTCACAGATGCTGAGTGGTATTATTTGGTCTGCATGTCCTTTGTATTCAACATTGGCCAAGGGTTACCGGGTAGATCTCTAGCAAATGGCCAAACCATTTGGCTGTGCAATGCCCATTCTGCTGATTGTGGAGTTTTTAGTCGCTGTTTGCTGGCGAAGACAGTGGTGTGCTTTCCTTTTATGGATGGGGTCATTGAGCTGGGTACAACTGATCAGGTCTCAGAAGACCTCAGTCTCATTCAACGGATCAGAACTTCTTTCTTGAATACTCTGGCTGTCAATGCCCAAGATAAGTCTGGAGCTATATTGAACACAAGAAATGAGGAAGATGGTGCTTGTGTAGCATTTGATCATAATGCCAATAATGTTAAACCAACTCCAGAAGTAGGATACGGAGTAATAATCAACACACTCTCTCCTAATAGCAGTTCAAATGCGTTACAAGCCAATACACCAGCAGATGGAGCATTGATGATTGAAAGGATAAATGGTGGCGCTTCTCAAGTTATGGATGATGATTTGAGCAATGGTGTCCACAACTCTATGAATTCTAGTGACTGTGTATCTCAATCTCTTGCCAGTCCTGAGATGATCGCTTCTCTTTCCAAGGGTGAGAATGTTACTGACCATTGTGCTAGAGACCTTCAAATGTGCAATAACTCAAAAATGACCTTAGTGGATCCTCGAAGCGATGAATGGCATTATCAGATGGTTCTTTCTACCCTTCTGAAAAGCTCGGACCAGTTAATCATGGGGATGCATTTTCAAAATTTTCATCAGGAATCAAGCTTTGTCAGTTGGAAGAAAGTTGGGCCAATGAGCTTCCAAAGGCCAAGAATAGGAACCCCACAAAATTTCTTGAAGAAGGTACTTTTGGAAGTTCCTCGGATGCACTTGGATGGGTTGCTAGAGTCTCAGGAAGAGAATGACTTTAAAGAGGGAATGAGACCAGAAGCTGATGAAAATGGCATGAACCACGTTTTGTCAGAAAGAAGGAGAAGAGCTAAACTAAATGAAAGGTTTCTAACACTTAGATCAATGGTCCCTTCAATTACTAAGGATGACAAGGTTTCAATACTAGATGATGCAATAGAATACCTTAGGAAGCTTGAAAAAAGGATAAGAGAGTTGGAAGCTCACAAGGAGCTAATAGATATAGAGACAAGAACCAAAAGATCACTTCAAGATATGATGGAGAGGACTTCTGATAATTATTTTAACAAAACTGATAATGGCAAGAAATCAGTGGCAAAAAAGAGGAAGGCTAGTGACATAGATGAGACAAGGCCAGAGATTAATTCAGATGCTTTAAAAGGCAATTCTACTAATGATGTTACTATCAATATCGGTGACAATGAAGTTGTTATAGAAATGAAGTGCCCTTCGAGAGAAGGAAGGTTTCTAAAAATTATGGAAGCAGTTAGCTGTCTCAATATAGATTTTAATTCAGTTCAGTCGACAGAAGCCGATGGGAATCTTTATCTGACCATCAAATCTAAGCTCACAGGACCAACTCCTGTATCAGCAAAGAGGATCAAACAAGCACTACAAAATGCGGCTTCCAAGTGTTGA 1863 0.4176 MVAENMKKQLALAARSIQWSYAIFWSGSATQPGVLSWGEGYYNGDIKTRKTNQAVELNSDQIGLQRSEQLRELFKSLKTAEASPQTKRPSAALSPEDLTDAEWYYLVCMSFVFNIGQGLPGRSLANGQTIWLCNAHSADCGVFSRCLLAKTVVCFPFMDGVIELGTTDQVSEDLSLIQRIRTSFLNTLAVNAQDKSGAILNTRNEEDGACVAFDHNANNVKPTPEVGYGVIINTLSPNSSSNALQANTPADGALMIERINGGASQVMDDDLSNGVHNSMNSSDCVSQSLASPEMIASLSKGENVTDHCARDLQMCNNSKMTLVDPRSDEWHYQMVLSTLLKSSDQLIMGMHFQNFHQESSFVSWKKVGPMSFQRPRIGTPQNFLKKVLLEVPRMHLDGLLESQEENDFKEGMRPEADENGMNHVLSERRRRAKLNERFLTLRSMVPSITKDDKVSILDDAIEYLRKLEKRIRELEAHKELIDIETRTKRSLQDMMERTSDNYFNKTDNGKKSVAKKRKASDIDETRPEINSDALKGNSTNDVTINIGDNEVVIEMKCPSREGRFLKIMEAVSCLNIDFNSVQSTEADGNLYLTIKSKLTGPTPVSAKRIKQALQNAASKC* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2738 620 PANTHER TRANSCRIPTION FACTOR TT8 4 615 - -
Dod04g2738 620 Pfam Helix-loop-helix DNA-binding domain 422 468 IPR011598 GO:0046983
Dod04g2738 620 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 7 184 IPR025610 -
Dod04g2738 620 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 421 481 IPR036638 GO:0046983
Dod04g2738 620 Gene3D - 413 482 IPR036638 GO:0046983
Dod04g2738 620 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 418 467 IPR011598 GO:0046983
Dod04g2738 620 Coils Coil 457 484 - -
Dod04g2738 620 MobiDBLite consensus disorder prediction 509 530 - -
Dod04g2738 620 MobiDBLite consensus disorder prediction 500 534 - -
Dod04g2738 620 PANTHER TRANSCRIPTION FACTOR EGL1 4 615 - -
Dod04g2738 620 SMART finulus 424 473 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2738 Dod-Chr4 51320153 51323372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2738 2 620 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 46.364 3.31e-173 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod04g2738 bHLH-MYC_N 2.1e-45 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2738 - - ahf:112732736 900.968