Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2730 ATGGGTTGTGGCTTATCCAAGGTGTGCTGCGGGATTGCAGACCAAGATGGTCAGGTTCCTGAGGCTCAAGTTGATGAAAATGAAGGCAGTGACTTGCCACAGTTTCGTGAATACTCAATTGATCAGCTCAGGAAGGCTACATCTGGATTTGCGGTAGAAAATATAGTTTCCGAGCATGGAGAAAAGGCGCCAAATGTGGTCTATAAAGGGAAACTTGAAAATCAAATGCGAATAGCCGTTAAACGGTTCAACAAACTAGCCTGGCCAGATGCCCAGCAATTTATGGGAGAGGCCAGGGCTGTAGGTCAGCTGAGGAGCCAAAGATTGGTAAATCTCCTTGGGTGTTGCTGTGATGGTGATGAGAGGTTGCTTGTTGCAGAATTTATGCCCAACGAGACTTTGGCGAAGCACTTGTTCCATTGGGAAACTCAGCCCATGAAATGGGCAATGCGACTGAGAGTTGCTTTCCACCTTGCCCAAGCCTTGGAATACTGTACCAGCAGGGGACGTGCGTTATACCATGACCTAAATGCATACAGAGTTCTTTTTGATTATGAATACAATCCTAAACTTTCATGCTTCGGTCTGATGAAAAACAGTCGAGATGGGAAAAGTTATAGTACAAATTTGGCATTTACTCCACCTGAGTATCTGAAGACAGGTAGAGTTACTCCAGAGAGTGTAACTTATAGCTTTGGGACCCTTTTACTTGACCTTCTCAGTGGAAAACATATTCCTCCAAGCCATGCTCTTGATCTGATTAGGGACAGGAATGTTACAACACTAACAGACTCTTGTTTAGAAGGACAATTTTCAACTGATGAGGGGACTGAATTAGTGCGTCTAGCCTCGCGATGTTTACAAGCTGAACCGCGAGAGCGTCCCAATCCAAATTCGTTGGTTGCTGCTCTAATACCTCTCCAGAAAGATTCTGAGGTTCCTTCTCTTGTGTTGATGGGTATACCAGATGGGACTGCTGTTTTTCCCCTTACTCCACTTGGTGAAGCTTGCCAACGGATGGATCTGACTGCCATGCATGAGGTGTTGGAGAAAATTGGGTATAAAGATGATGAGGGTGCAGCAACTGAGCTTTCATTCCAAATGTGGACCAACCAGATGCAGGAAACATTGAACTCAAAGAAGAAGGGGGACGCTGCTTTTCGGCACAAGGACTTTAGAACTGGAATTGATAGCTATACGCAGTTCATTGATGTTGGAACCATGGTTTCTCCGACGGTTTATGCGCGTCGCAGTCTCTGTTATCTCATCAGCAACATGCCAAACGAAGCACTTAACGATGCATCGCAGGCGCAAATAATATCTCCTGTTTGGTACATAGCATCTTATCTACAAGCTGCTTGTCTTTTTGCACTGGGCAGAGAGTCTGAGGCTCAAGCAGCACTTAAAGAGGCTTCTTCACTTGAAGCCAAAAAGAACACAACTTAA 1446 0.4516 MGCGLSKVCCGIADQDGQVPEAQVDENEGSDLPQFREYSIDQLRKATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNKLAWPDAQQFMGEARAVGQLRSQRLVNLLGCCCDGDERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVAFHLAQALEYCTSRGRALYHDLNAYRVLFDYEYNPKLSCFGLMKNSRDGKSYSTNLAFTPPEYLKTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDRNVTTLTDSCLEGQFSTDEGTELVRLASRCLQAEPRERPNPNSLVAALIPLQKDSEVPSLVLMGIPDGTAVFPLTPLGEACQRMDLTAMHEVLEKIGYKDDEGAATELSFQMWTNQMQETLNSKKKGDAAFRHKDFRTGIDSYTQFIDVGTMVSPTVYARRSLCYLISNMPNEALNDASQAQIISPVWYIASYLQAACLFALGRESEAQAALKEASSLEAKKNTT* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2730 481 PANTHER TPR DOMAIN KINASE 1 480 - -
Dod04g2730 481 ProSiteProfiles Protein kinase domain profile. 53 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2730 481 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 480 IPR045845 GO:0004672|GO:0009742
Dod04g2730 481 Pfam Protein tyrosine and serine/threonine kinase 66 303 IPR001245 GO:0004672|GO:0006468
Dod04g2730 481 Gene3D Phosphorylase Kinase; domain 1 24 128 - -
Dod04g2730 481 SUPERFAMILY TPR-like 380 475 IPR011990 GO:0005515
Dod04g2730 481 SUPERFAMILY Protein kinase-like (PK-like) 33 313 IPR011009 -
Dod04g2730 481 Gene3D Tetratricopeptide repeat domain 370 481 IPR011990 GO:0005515
Dod04g2730 481 Gene3D Transferase(Phosphotransferase) domain 1 130 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2730 Dod-Chr4 51245084 51250435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2730 38 310 Receptor kinase-like Gene Family AT3G58690 33.221 5.79e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Dod04g2730 PK_Tyr_Ser-Thr 3.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2730 K14500 - gmx:100797107 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2730 04 51245084 51250435 Dod04g2730 04 51245084 51250435 ECH