Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2722 ATGAGCAAGATAGTCCTTCAGGTTGAAGGTGTAAGGACTGGTCGTTCCATGAGACTCATTGAAAACTCTCTTCAGGCACTCCCTGGTGTCCAAGGCGTAGAAGTCAACCCAGAACTGAACAAAGTATCTCTCTCTTATAAACCCGACTTAACAGGACCAAGGAACTTCATCAACGTGATTGAGGAAACTGGGTCTAGGCGTTTCAAGGCAAAGATATTCCCTGAAGAAGGAGGAAAAAGAAACACTCATAGAAAGGAGGAAATCAAGCAATACTATAGATCATTCTTATGGAGTTTGGTGTTTACTGTTCCAGTGTTTCTAACCTCTATGGTGCTCATGTATATCCCAGGAATTAAGCATGGAATAGATGCAAAAGTTGTGAATATGCTCACTGTGGGGGAGATAATAAGATGGGTGCTGGCCACACCGGTGCAGTTCATTATAGGCAGAAGATTTTACTCTGGTGCATACAAAGCACTGCGCCTTGGCTCTGCTAACATGGATGTTTTGATTGCCTTGGGAACAAATGCAGCATACTTCTATTCAGTGTATTCTGTTCTAAGAGCTGCTGCCTCTCACAGTTTCGAGGGTACTGATTTCTTTGAGACTAGTGCTATGCTCATTTCGTTTATTCTGCTAGGCAAGTATCTTGAAGTTTTGGCCAAAGGGAAGACATCCAATGCAATAGCCAAGCTCATGAACTTGACTCCTGACACAGCAATCTTGTTGACATTGGACAATGAAGGGAATGTTATTGGTGAACAAGAGATTGATAGCCGGTTGATTCAGAAGAATGATGTGATTAAAATCATTCCCGGTGCAAAAGTGGCTTCGGATGGATTTGTTATATGGGGTCAAAGCCACGTGAATGAGAGCATGATTACAGGTGAGGCACGTCCTGTGGCAAAGAGGAAAGGTGACACCGTTATTGGAGGAACTGTGAATGAGAACGGGGTGTTGCATATTAAGGCAACTCGGGTTGGTTCAGAGAGTGCTCTTTCCCAAATAGTGAGACTTGTTGAATCAGCACAGATGGCCAAGGCTCCTGTGCAGAAGTTTGCTGACCGAATTTCCAAATACTTTGTGCCATTGGTCATTTTAATATCATTTTCAACTTGGCTTGCCTGGTTTTTGGCTGGAAGGATTCATGCTTACCCCAAGTCTTGGATACCATCTTCCATGGACAGCTTTGAGCTTGCTTTGCAGTTTGGGATTTCTGTCATGGTCATAGCCTGCCCGTGTGCTTTGGGTTTAGCAACACCAACTGCGGTTATGGTTGGCACTGGAGTTGGTGCATCTCAAGGTGTGCTGATCAAAGGAGGGAAGGCGTTAGAAAGTGCACATAAGGTGAACTGCATTGTTTTTGACAAGACAGGTACCCTCACTTTTGGGAAACCTGTGGTAGTAAATACAAAACTAATGACAAATATGGTACTCCAGGAATTCTATGAACTTGTGGCTGCAGCTGAGGTGAATAGTGAGCATCCACTGGCTAAGGCCATAGTTGAGTATGCCAAAAAGCTGAGAGATGAAGAGAACCCAGCTTGGCCAGAAGCACGGGATTTTGTCTCCATTACTGGACATGGAGTGAAGGCCAACGTTCGGAATAAGGAAATAATTGTGGGAAACAAGAGCTTGCTGGCCGACTACAACATTGCAGTTCCTGCTGATGCTGAAGATATACTTGCTGAAGCTGAAGGGATGGCTCAAACTGGGATTTTAGTATCTATAAACGGGGAATTGGTCGGGGTTTTAGCAATATCCGATCCATTGAAACCCAGTGCTCAAGAAGTCATTTCCATTCTCAAGTCCATGAAAATTAGGAGCATCATGGTGACTGGGGACAACTGGGGTACTGCTAATTCTATAGCAAAGGAAGTTGGAATTGAAACTGTTATTGCTCAGGCCAAACCCGAGCAGAAGGCAGAGCAAGTTAAGGACTTGCAGGCAGAAGGGTACACAGTGGCTATGGTGGGGGATGGTATCAATGATTCGCCAGCACTTGTGGTAGCAGACGTAGGAATGGCAATTGGTGCTGGCACAGACATTGCTATTGAGGCTGCTGATATTGTCCTGATGAAGAGCAACTTGGAGGATGTCATTACTGCCATTGACCTTTCCAGGAAAACATTTTCCCGTATCCGCTTGAATTACATGTGGGCTTTGGGGTATAACCTGCTTGGCATCCCAATTGCTGCAGGGGCACTTTTCCCTTGTACAGGATTTCGGTTGCCACCATGGATTGCTGGGGCTGCAATGGCTGCCTCTTCTGTTAGTGTTGTTTGCTGTTCTTTACTCCTGAAATATTACAGGAGACCCAAGAAGCTGGACAACCTTGAGATAAGGGGTATAAGCATTGAGTGA 2364 0.4497 MSKIVLQVEGVRTGRSMRLIENSLQALPGVQGVEVNPELNKVSLSYKPDLTGPRNFINVIEETGSRRFKAKIFPEEGGKRNTHRKEEIKQYYRSFLWSLVFTVPVFLTSMVLMYIPGIKHGIDAKVVNMLTVGEIIRWVLATPVQFIIGRRFYSGAYKALRLGSANMDVLIALGTNAAYFYSVYSVLRAAASHSFEGTDFFETSAMLISFILLGKYLEVLAKGKTSNAIAKLMNLTPDTAILLTLDNEGNVIGEQEIDSRLIQKNDVIKIIPGAKVASDGFVIWGQSHVNESMITGEARPVAKRKGDTVIGGTVNENGVLHIKATRVGSESALSQIVRLVESAQMAKAPVQKFADRISKYFVPLVILISFSTWLAWFLAGRIHAYPKSWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGKALESAHKVNCIVFDKTGTLTFGKPVVVNTKLMTNMVLQEFYELVAAAEVNSEHPLAKAIVEYAKKLRDEENPAWPEARDFVSITGHGVKANVRNKEIIVGNKSLLADYNIAVPADAEDILAEAEGMAQTGILVSINGELVGVLAISDPLKPSAQEVISILKSMKIRSIMVTGDNWGTANSIAKEVGIETVIAQAKPEQKAEQVKDLQAEGYTVAMVGDGINDSPALVVADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYMWALGYNLLGIPIAAGALFPCTGFRLPPWIAGAAMAASSVSVVCCSLLLKYYRRPKKLDNLEIRGISIE* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2722 787 Gene3D - 222 344 - -
Dod04g2722 787 Gene3D - 2 64 - -
Dod04g2722 787 SFLD Haloacid Dehalogenase 436 710 - -
Dod04g2722 787 Pfam haloacid dehalogenase-like hydrolase 450 672 - -
Dod04g2722 787 CDD P-type_ATPase_Cu-like 93 768 - -
Dod04g2722 787 SUPERFAMILY Calcium ATPase, transmembrane domain M 199 746 IPR023298 -
Dod04g2722 787 PRINTS P-type cation-transporting ATPase superfamily signature 290 304 - -
Dod04g2722 787 PRINTS P-type cation-transporting ATPase superfamily signature 454 468 - -
Dod04g2722 787 PRINTS P-type cation-transporting ATPase superfamily signature 583 594 - -
Dod04g2722 787 PRINTS P-type cation-transporting ATPase superfamily signature 605 615 - -
Dod04g2722 787 PRINTS P-type cation-transporting ATPase superfamily signature 658 677 - -
Dod04g2722 787 PRINTS P-type cation-transporting ATPase superfamily signature 681 693 - -
Dod04g2722 787 SUPERFAMILY Calcium ATPase, transduction domain A 254 340 IPR008250 -
Dod04g2722 787 SUPERFAMILY HMA, heavy metal-associated domain 1 66 IPR036163 GO:0046872
Dod04g2722 787 Gene3D - 421 715 IPR023214 -
Dod04g2722 787 PANTHER ATP7, ISOFORM B 1 778 - -
Dod04g2722 787 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 207 737 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod04g2722 787 Pfam E1-E2 ATPase 249 432 - -
Dod04g2722 787 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 167 767 IPR027256 GO:0006812|GO:0016021|GO:0019829
Dod04g2722 787 Gene3D - 539 589 IPR023299 GO:0000166
Dod04g2722 787 Gene3D - 461 538 IPR023299 GO:0000166
Dod04g2722 787 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 1 778 - -
Dod04g2722 787 SFLD p-type atpase 436 710 IPR044492 -
Dod04g2722 787 CDD HMA 20 64 IPR006121 GO:0046872
Dod04g2722 787 ProSitePatterns E1-E2 ATPases phosphorylation site. 456 462 IPR018303 -
Dod04g2722 787 SUPERFAMILY HAD-like 453 764 IPR036412 -
Dod04g2722 787 PRINTS H+-transporting ATPase (proton pump) signature 689 714 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod04g2722 787 PRINTS H+-transporting ATPase (proton pump) signature 658 674 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod04g2722 787 ProSiteProfiles Heavy-metal-associated domain profile. 3 64 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2722 Dod-Chr4 51199285 51202230 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2722 1 787 Primary Pumps ATPases AT1G63440 81.037 0.0 1313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2722 K17686 - gmx:100810141 1411.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2722 04 51199285 51202230 Dod04g2722 04 51199285 51202230 ECH