Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2719 ATGCATGATCTAATACAAGATATGGGACAAGAAATTGTTCGTCAAGAATGTGTCGATGATCCTGGAAAACGCAGTCGATTATGGAAGCATGAGGACATTTACCAAGTTTTTGAAGAGAACAAGGGGACAGATGCCATCCAATGCATATTACTTGACCTATGCAAGATCAGAGAAGTTCCCCTACATGCTGAAACTTTTAAAATGATGCGTAATATGAGATTGCTTGAGTTCCACAATCATAAGAAATTTCGTCGGGTGTTCTACAGGTCTAACTCATTAAAGGAGGACTCAGAAGTGGACATTCCTACATTTCTTGAAAGTCTTCCCAATAAGTTAAAATTTCTTCATTGGGATGGGTTCCCTCAAAGATCATTGCCGCCGGACTTTTGCCCAGAAAATCTTGTTGAAATTGATATGCGAAATAGTGATCTTAAACAACTTTGGGATGGAGATAAGGGTTTACCAAAGTTGAAAAGGCTTAACCTCAGTGGTTCTTGGAAACTGAAGCAAATACCTGACCTCTCACGGTCTCCAAATATTGAGGAAGTAATTCTTAGTGACTGTAGTAGTTTGAATGCAGTTCACTCCTCTATATTTCTCAGCAAGCTCAACTGTTTATGGTTGAATGGCTGTGTTCAGCTTGAGAGTTTAAATCTTCTTAGCGGTATTCTATCGAGATCTTCTGGATTAATAGTTCTCTTTAACTGTCACAGCCTTAAGGAGTTTTCCGTCGGGGCTCTGTCATTTAGTTGTTCACGTCATGGATTACGGAAGATCGTGACTTATGCCCTGAAAGCCAAAAGTTCTAGTTTCCTGGCCTATTTTTCAGATGCTTTTCGACCAATTGCTAGTGCTGAAATATATGAACCGGCGAGCGATATACCCTTACTGGACTTACAAATGTTGAGAGAACGTCTGCCCTCATCATTTGCAAGTATCAATGAGCTTTGTTGGTTAGATCTCTCAAATTGTGAATCCCTCACAGGTCTGCCAGTCGACCTTTGTCAGATGAAATTTCTTAGAAGACTTTATCTCGGTGGTTGCTTGAATTTGAAAAGTTTCCCTGAAATCAACCAGACAATGGAAAATTTAACGGTGATAATCTTAGACGAAACAGCAATACAAGGTCTACATTCATCCTTCAACCATTTAGTAGGGCTTGAAGAATTGAGCTTGCAGAGGTGCCAAAGGCTTGAGTTTATTCCATCTTCTATTGGAAGTCTCAGCAGACTCTGCAAGTTAGACCTCGCCTACTGTGAATCACTTGAAACTCTTCCTAGCAGCATTTTCAAATTGAAGTTGACAAAACTTGATTTGCGCGGTTGCTCAATGCTAAGGACTTTACCAGAGATCACGGAGCCTGTAGAAAGCATTGTACACCTTTGGTTAACAAGAACTGCAATAAAAGAATTACCTTCCACATTGGACTATTTGGTTCGGCTCCAAACGTTGCACCTGAAATTTTGCTGCGATCTGGAGTTTCTTCCAAGCAGCATTGTTAATCTAAAGCTTCTCTCTGATCTTGATTGTTCAGGCTGTGCCAAATTAACAGAAATCCCAAACGATATAGGTCGCTTGTCATCACTAAGAGAATTGTCATTGCAAGGAAGTGTTATTGTGAACCTTCCTGATAGTATTGCTCATCTTTTAAACTTGAAATCATTGGATTTAAGTGACTGCAAAATGCTTGAATGTATCCCAGAGCTTCCACCATCTCTGAAACAGTTGTCGGCATTTGATTGCCCAGCCATTAGGAGAGTGTCAAATCAGATTTCCCAGGATGCAGGTTCCAAAGAGAGTACCTTCAAACTTCACTTCACAAATAGTCAAGAATTGGATTCTAGTTCTCAGAGTAATATTGAGGCTGATGCAGAGCATAAGATGCTCCAGGATGCATATAGGTCTGTGTTCTTCTGCTTTCCAGGGAGTACAGTTCCACGTTGGTTCCCTTATCGATGCATGGGACCCTCAGTTACCTTGGATGCAGCTCCTCTAGATCGCCGTAATGATGAAAGGCTCATTGGTTTTGCACTTTGTGTAGTTCTAGTACCTCCTGAAAATGAGAGTAATAGAGTTTTGCATGAAATTTGCTACAGATTCACATTTAAATATGATGATGTCCTACATGTTTTTCCTAGCGATGATCTGCTAGGATGCCGTTTCAATTGGAAGGGTAAAGATAGATTTATGTCCCATGGTCACACATTGGTGTGGAAATATCACTTGGGATCTACAAGCAGCAACTACATGCTCTCTCATGCCCACAACTTCACTTTCGAGATCCTTGATGCAGTTGATACGGTACTCCACGGGCTCTCATATTTTCCAGTTTCCATGGTGCATGAGTGCGGAATATGCCCTCTTTATGCCAAAGAAAGAGATGATAATTCTCGTGCTGAACTGCTGGGTTCATAA 2415 0.4083 MHDLIQDMGQEIVRQECVDDPGKRSRLWKHEDIYQVFEENKGTDAIQCILLDLCKIREVPLHAETFKMMRNMRLLEFHNHKKFRRVFYRSNSLKEDSEVDIPTFLESLPNKLKFLHWDGFPQRSLPPDFCPENLVEIDMRNSDLKQLWDGDKGLPKLKRLNLSGSWKLKQIPDLSRSPNIEEVILSDCSSLNAVHSSIFLSKLNCLWLNGCVQLESLNLLSGILSRSSGLIVLFNCHSLKEFSVGALSFSCSRHGLRKIVTYALKAKSSSFLAYFSDAFRPIASAEIYEPASDIPLLDLQMLRERLPSSFASINELCWLDLSNCESLTGLPVDLCQMKFLRRLYLGGCLNLKSFPEINQTMENLTVIILDETAIQGLHSSFNHLVGLEELSLQRCQRLEFIPSSIGSLSRLCKLDLAYCESLETLPSSIFKLKLTKLDLRGCSMLRTLPEITEPVESIVHLWLTRTAIKELPSTLDYLVRLQTLHLKFCCDLEFLPSSIVNLKLLSDLDCSGCAKLTEIPNDIGRLSSLRELSLQGSVIVNLPDSIAHLLNLKSLDLSDCKMLECIPELPPSLKQLSAFDCPAIRRVSNQISQDAGSKESTFKLHFTNSQELDSSSQSNIEADAEHKMLQDAYRSVFFCFPGSTVPRWFPYRCMGPSVTLDAAPLDRRNDERLIGFALCVVLVPPENESNRVLHEICYRFTFKYDDVLHVFPSDDLLGCRFNWKGKDRFMSHGHTLVWKYHLGSTSSNYMLSHAHNFTFEILDAVDTVLHGLSYFPVSMVHECGICPLYAKERDDNSRAELLGS* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2719 804 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 244 - -
Dod04g2719 804 Pfam C-JID domain 640 792 IPR045344 -
Dod04g2719 804 Pfam Leucine Rich Repeat 133 152 IPR011713 -
Dod04g2719 804 Gene3D Ribonuclease Inhibitor 296 433 IPR032675 -
Dod04g2719 804 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 387 715 IPR044974 GO:0006952
Dod04g2719 804 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 305 401 IPR044974 GO:0006952
Dod04g2719 804 Gene3D Ribonuclease Inhibitor 28 253 IPR032675 -
Dod04g2719 804 Gene3D Ribonuclease Inhibitor 434 622 IPR032675 -
Dod04g2719 804 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 387 715 - -
Dod04g2719 804 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 305 401 - -
Dod04g2719 804 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 244 IPR044974 GO:0006952
Dod04g2719 804 SUPERFAMILY L domain-like 1 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2719 Dod-Chr4 51184675 51189331 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2719 407 580 WRKY Transcription Factor Family AT4G12020 29.885 3.04e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2719 - - adu:107481402 865.529