Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2703 ATGAAGTTATGTACTTCATTGTTGTTTCTATGTTTGGTTTCCACGCTCTCATTTGTGGCTTCTGCTACGGTGGCCTCAAATGAAGTTTTGGCGCTTAAAAGCTTCAAAGAAGCTGTGTGTGATGATCCACAACTAGTTTTGTCAAATTGGAATACACTGGTTTCAGATCCTTGTGACTGGAATGGTGTTTCATGCAGTGGGACTCGAGATCATGTCATCAAGCTAAACATCTCAGGGTCATCGTTAAGGGGATTTCTTGCACCAGCATTGGGCCAAATCACCTACTTGCAAGAGCTAATCTTGCATGGCAACAATTTTATTGGAGTTATACCGAAAGAATTGGGCATGTTGAAATCTCTCAAGGTGTTGGATTTGGGAATGAATCAGTTAACAGGACCAATTCCTCCAGAGATTGGAAATTTGACCCAAGCTGTGAAAATAAACCTGCAGTCCAATGGGTTGATTGGTAGGCTACCCCCAGAGCTTGGAAATTTGAGGAACCTCCAAGAACTTCGGCTGGATAGGAATAAGCTTCAAGGTCCTGTTCCTGCTGGTGGCAGTTTTGATTCAAATATGCATGAGATGTATGCCTCAAATGTGAATTTAACGGGCTTTTGTCGTTCGTCTCAGTTAAAAGTTATTGATTTTTCATATAACTTTCTTGTTGGTAGCATACCCAAATGCTTGGGGTATCTTCCAAGATCAAGCTTTCAAGGGAATTGCCTACAGATTAAAGACATAAAGCAGCGGACTTCGGCACAATGTGCTGGTGCTTCACCTGCCCAGGGCCATCCAGTAGGGAACCTTAAACATCGACATGCTGAACATGTGTCCAAGTCCAAGCATCAAGGAGCATCAAAACCTGCCTGGCTTTTGGCTTTAGAAATAGTAACGGGAACCATGGTTGGCTCTCTCTTTCTGATAGCCATTTTCACTGCATATCAGAGGTTTAACAGCAAATCATCTATCATTATTCCTTGGAAAAAATCATCAAGCGAGAAGGAACACATGACTGTATATATAGAATCCGAGATGTTGAAGGATGTGATGAGGTATAGCAGACAAGAGCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGTTCCTCACCAGATAGTGTGGTCTACAAGGGTACAATGAAAGGTGGGCCTGAGATTGCTGTAATTTCCCTCTGCATCAAGGAAGAGCATTGGACGGGTTACCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTGAATCATGAGAATACAGGGAAACTACTAGGCTATTGTAGAGAGAGCAATCCTTTTACCAGGATGCTGGTTTTCGAGTATGCTTCAAATGGGACACTTTATGACCACCTACATTGTTATGGAGATGCGTGCCAGTTATCTTGGACCCGGCGTATGAAAATCATCATAGGCATTGCTCGCGGCCTCAGGTATTTGCACACTGAAATTGAGCCGCCATTCACTATCTCTGAGTTGAACTCCAACGCTGTATACCTCACTGAAGACTTTTCCCCTAAGCTGGTTGATTTCGAGAGTTGGAAGACAATTCTCGAAAGATCAGAAAAGAATTCCGGTTCTGTTGGCAGCCAATGCTCTGGTGTTCTTCCAAATTCCTTGGCGGCGCGCCATCTGGATACCAAAGGAAACGTATATGCTTTTGCCGTGCTTCTACTGGAGATAATCAGTGGGAGACCTCCATACTGCAAGGACAAAGGCTACTTGGTGGACTGGGCAAGGGAGTATCTTGAAATGCCAGAAGTAATGTCATATGTGGTGGATCCTGAGTTGAAACATTTCAAATATGAAGACCTCAAAGTTATATGTGAGGTTGTAACTCTTTGCATAGATCCTGACCCCACTGCCCGTCCATCAATGCGGGAATTATGTGGCATGCTGGAGAGCAGAATTGACACATCAATAAGCGTGGATCTCAAGGCATCGTCTTTGGCTTGGGCTGAACTTGCACTCTCATCATAA 1983 0.4387 MKLCTSLLFLCLVSTLSFVASATVASNEVLALKSFKEAVCDDPQLVLSNWNTLVSDPCDWNGVSCSGTRDHVIKLNISGSSLRGFLAPALGQITYLQELILHGNNFIGVIPKELGMLKSLKVLDLGMNQLTGPIPPEIGNLTQAVKINLQSNGLIGRLPPELGNLRNLQELRLDRNKLQGPVPAGGSFDSNMHEMYASNVNLTGFCRSSQLKVIDFSYNFLVGSIPKCLGYLPRSSFQGNCLQIKDIKQRTSAQCAGASPAQGHPVGNLKHRHAEHVSKSKHQGASKPAWLLALEIVTGTMVGSLFLIAIFTAYQRFNSKSSIIIPWKKSSSEKEHMTVYIESEMLKDVMRYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLNHENTGKLLGYCRESNPFTRMLVFEYASNGTLYDHLHCYGDACQLSWTRRMKIIIGIARGLRYLHTEIEPPFTISELNSNAVYLTEDFSPKLVDFESWKTILERSEKNSGSVGSQCSGVLPNSLAARHLDTKGNVYAFAVLLLEIISGRPPYCKDKGYLVDWAREYLEMPEVMSYVVDPELKHFKYEDLKVICEVVTLCIDPDPTARPSMRELCGMLESRIDTSISVDLKASSLAWAELALSS* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2703 660 SUPERFAMILY L domain-like 26 233 - -
Dod04g2703 660 Pfam Protein tyrosine and serine/threonine kinase 366 632 IPR001245 GO:0004672|GO:0006468
Dod04g2703 660 Gene3D Ribonuclease Inhibitor 25 262 IPR032675 -
Dod04g2703 660 ProSiteProfiles Protein kinase domain profile. 362 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2703 660 Gene3D Transferase(Phosphotransferase) domain 1 444 649 - -
Dod04g2703 660 SUPERFAMILY Protein kinase-like (PK-like) 339 635 IPR011009 -
Dod04g2703 660 Gene3D Phosphorylase Kinase; domain 1 325 443 - -
Dod04g2703 660 PANTHER PROTEIN MALE DISCOVERER 2 5 660 - -
Dod04g2703 660 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 660 - -
Dod04g2703 660 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2703 Dod-Chr4 50994428 50999481 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2703 42 639 Receptor kinase-like Gene Family AT5G45780 29.112 8.89e-60 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Dod04g2703 PK_Tyr_Ser-Thr 5.7e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2703 - - gmx:100779744 1066.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2703 04 50994428 50999481 Dod04g2703 04 50994428 50999481 ECH
Dod02g1085 02 13549066 13554184 Dod04g2703 04 50994428 50999481 PCT