Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2694 ATGTGGCGGTTGGCGATTTCTGAACGGCGAAGAACACACTCGAAGCTTCTATGTGCCTTCACGCTCCTATCCCGCAGCATGGGCGGCGGCCCCCGCACCTTCCCCGGCGGCGTGAACAAGTGGAAGTGGAAGCGCATGCATGAGAAGCGCGCCAGAGACAAAGAGAACAGACTCCTCGAACAAGAGAAGCAGCTCTACCAGGCTCGCATTCGCTCCCACATCCGCTCCCAGCTCGCACCCGACCAGTCCGCCACCGCCGCCGCCGCCACCCACGGCCCCATGTCCCCCACCGACCACATCAAAGCCCTCGCCAACCGTTTCATGAAGGAAGGCGCTGAAGATCTCTGGAACAACGACGACGGTCCCCTAACTCCTCATCCTCCTCCGAGTCCCACTCCCACGCGCCTCCATGGCCCGTCGAGCACGCGCCGGGGCTCAATTTCGTCGCCGGTGGATTTGCGGAAGCTGATATCCGAATCTCCAAACCCCAATTCGAGGAATTCGGGTGGGAATTTTGAGCAGAGCAGGGGTTACCGTTCTGTTTCTGAGGTGAATTCGGGTAAGAAGGTGGAGGGTGGTTTGAGCAGTAAGAAGCTGGTGCCTAATGGGAGGAGGCGGTTTTGGAGGAATGATAGTTCTTCTTCGAGTGAGAATGAGAGTGATGATGATGATGAGGAGAATGGTTCGAGGGTTGGTTGGGATGTGAGGAAGATGGGAAGCAGTGCTTCTTTGGGGAAACATGATGTGAAGAGGAAGAGGAGGGTGATGCCTAAGCCGTATGATGAAGAGACTGATTTTGCGGAGCAGGTTGAGTTGATTAAGTATGAGCTTAGCAAGAAGAAGCTGGCCCAGAAGGAGCAGCAGCAGGAGGAGGAGCAAGAAACCATCCTAACTCAATCAAGATTTGACCAGTGTGGTATATCGCCTTTGACAGTAAAGGCGCTTTCTTCAGCTCGTTATATCCACATGACCCGGGTACAAGAGGCTAGTCTCCCTATTTGCCTTGAGGGTAAGGATGCTCTGGTCAAAGCTAAAACTGGCACTGGAAAAAGTGCGGCATTTTTGCTTCCTGCTATTGAAACAGTTCTGAAAGCTATGAGTAGCTATGCGTCTCAACGTGTGCCTCCAATACTTGTTCTTATTCTCTGCCCTACCAGAGAACTTGCCAGTCAAATTGCTGCTGAAGCAAAGGCTTTGCTCAAATATCATGATGGCATTGGCGTACAAACTCTTGTAGGAGGTGTACGATTTAAACTTGACCAAAACAGCTTGAGTCAGATCCATGCCAGATACTTGTTGCTACCCCTGGTAGGTTGCTAG 1320 0.5258 MWRLAISERRRTHSKLLCAFTLLSRSMGGGPRTFPGGVNKWKWKRMHEKRARDKENRLLEQEKQLYQARIRSHIRSQLAPDQSATAAAATHGPMSPTDHIKALANRFMKEGAEDLWNNDDGPLTPHPPPSPTPTRLHGPSSTRRGSISSPVDLRKLISESPNPNSRNSGGNFEQSRGYRSVSEVNSGKKVEGGLSSKKLVPNGRRRFWRNDSSSSSENESDDDDEENGSRVGWDVRKMGSSASLGKHDVKRKRRVMPKPYDEETDFAEQVELIKYELSKKKLAQKEQQQEEEQETILTQSRFDQCGISPLTVKALSSARYIHMTRVQEASLPICLEGKDALVKAKTGTGKSAAFLLPAIETVLKAMSSYASQRVPPILVLILCPTRELASQIAAEAKALLKYHDGIGVQTLVGGVRFKLDQNSLSQIHARYLLLPLVGC* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2694 439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 294 425 IPR027417 -
Dod04g2694 439 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 33-RELATED 29 425 - -
Dod04g2694 439 Pfam DEAD/DEAH box helicase 324 424 IPR011545 GO:0003676|GO:0005524
Dod04g2694 439 Coils Coil 272 295 - -
Dod04g2694 439 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 331 406 IPR014001 -
Dod04g2694 439 MobiDBLite consensus disorder prediction 77 98 - -
Dod04g2694 439 Coils Coil 44 64 - -
Dod04g2694 439 MobiDBLite consensus disorder prediction 136 182 - -
Dod04g2694 439 Gene3D - 265 431 IPR027417 -
Dod04g2694 439 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 300 328 IPR014014 GO:0003724
Dod04g2694 439 PANTHER RNA HELICASE 29 425 - -
Dod04g2694 439 MobiDBLite consensus disorder prediction 113 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2694 Dod-Chr4 50879806 50881841 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2694 27 122 Inorganic Solute Cotransporters AT2G37920 40.594 1.61e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2694 - - lang:109349967 534.258