Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2693 ATGAGCTTGCGGATGCTTGTACTTGACGAAGCTGATCATTTACTGGACCTTGGGTTTCGAAAGGATTTAGAAAAAATTGTTGATTGTTTGCCCCGTCAAAGGCAGTCATTGCTGTTTTCTGCAACCATGCCCAAGGAGGTCCGTCGTATTTCTCAGCTTGTTTTGAAAAGGGATCACACGTATGTTGATACAATTGGTATGGGTTGTGTGGAAACTCCCCTGAAGGTCAAGCAGTCTTTTCTAATTGCTCCACATGAATCGCATTTTCAGATAGTGCACCATATTTTGAAGGAACATATCATGCAAACACCTGATTATAAGGTTATTGTTTTCTGTATAACTGGGATGGTAACATCACTTATGTATCAACTTCTCCGCGAAATGAAAATGAACGTTCGGGAGATACATTCCCGAAAACCTCAGCTCTATCGAACTCGCATATCAGATGAGTTCCGGGAATCCAAACAACTGATTCTTGTCTCATCTGATGTCTCATCCCGAGGAATAAATTACCCTGATGTTACTTTAGTCATACAGGCAGGAATTCCTCCTGATCGTGAACAATATATACATAGACTTGGGAGAACAGGCCGGGAAGGCAAAGAAGGGGAAGGCGTATTGTTGATTGCTCCATGGGAAGAGTACTTTTTAGAAGAAATCAAGGATCTCCCTCTGGAGAAATTCCCTTTTCCGGATATAGATCCACAGGCAAAGCTTAAGATTGAACATTCCATGGCAAAGATTGATAGTGACGTCAAAGAAGGAGCATATCATGCTTGGCTTGGTTACTATAACTCGATTAGGGAAATTGGGAGGGAAAAGACCACTATAGCTGAGCTTGCAAACCGGTTTTCTGAATCAATTGGTTTACAGAAGCCTCCTGCTCTCTTTCGAAAAACGGCACTGAAAATGGGTTTGAAAGACATTCCTGGCATAAGAATTCGTAGATAG 951 0.4185 MSLRMLVLDEADHLLDLGFRKDLEKIVDCLPRQRQSLLFSATMPKEVRRISQLVLKRDHTYVDTIGMGCVETPLKVKQSFLIAPHESHFQIVHHILKEHIMQTPDYKVIVFCITGMVTSLMYQLLREMKMNVREIHSRKPQLYRTRISDEFRESKQLILVSSDVSSRGINYPDVTLVIQAGIPPDREQYIHRLGRTGREGKEGEGVLLIAPWEEYFLEEIKDLPLEKFPFPDIDPQAKLKIEHSMAKIDSDVKEGAYHAWLGYYNSIREIGREKTTIAELANRFSESIGLQKPPALFRKTALKMGLKDIPGIRIRR* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2693 316 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 61 IPR014001 -
Dod04g2693 316 PANTHER RNA HELICASE 1 315 - -
Dod04g2693 316 Pfam DEAD/DEAH box helicase 2 49 IPR011545 GO:0003676|GO:0005524
Dod04g2693 316 Gene3D - 71 301 IPR027417 -
Dod04g2693 316 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 33-RELATED 1 315 - -
Dod04g2693 316 CDD SF2_C_DEAD 76 209 - -
Dod04g2693 316 SMART helicmild6 119 200 IPR001650 -
Dod04g2693 316 Gene3D - 1 63 IPR027417 -
Dod04g2693 316 Pfam Helicase conserved C-terminal domain 94 199 IPR001650 -
Dod04g2693 316 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 214 IPR027417 -
Dod04g2693 316 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 95 241 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2693 Dod-Chr4 50877910 50879767 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2693 2 226 Eukaryotic Initiation Factors Gene Family AT3G19760 27.273 4.29e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2693 - - gmx:100808520 574.318