Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2677 ATGGATAAACATCAAGTTTTATTTCCTACCTCGTCTACATCACCAGCTACTTCTAATGGTTTTCATGCTGAAAGGAGGGAAGATGCTTTAAGAGCTCCAAAGAAGGAGTCAAGCCAAAAGGGTGGCAAAGAGATCAAGCAGCACAGATATGCATTCCAAACAAGGAGTCAGATTGACATACTGGACGATGGGTACCGGTGGAGAAAGTATGGGGAAAAAGCCGTCAAAAACAATAAATTCCCTAGGAGTTACTACAGGTGCACTTATCAAGGCTGCAATGTGAAGAAACAAATCCAACGCCATTCCACAGATGAACAGATCGTGGTGACAACCTATGAAGGGATGCATATTCACCCTGTCGAGAAACCAACTGAAAGCTTCGAGCAGATCTTGAGAAACTTTCAATACGCACCGTACCCAACTCTATAA 429 0.4312 MDKHQVLFPTSSTSPATSNGFHAERREDALRAPKKESSQKGGKEIKQHRYAFQTRSQIDILDDGYRWRKYGEKAVKNNKFPRSYYRCTYQGCNVKKQIQRHSTDEQIVVTTYEGMHIHPVEKPTESFEQILRNFQYAPYPTL* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2677 142 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 137 IPR044810 GO:0003700
Dod04g2677 142 ProSiteProfiles WRKY domain profile. 56 121 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g2677 142 MobiDBLite consensus disorder prediction 1 20 - -
Dod04g2677 142 Gene3D WRKY domain 48 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod04g2677 142 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 1 137 - -
Dod04g2677 142 Pfam WRKY DNA -binding domain 62 118 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g2677 142 SUPERFAMILY WRKY DNA-binding domain 53 120 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod04g2677 142 SMART WRKY_cls 61 120 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g2677 142 MobiDBLite consensus disorder prediction 1 49 - -
Dod04g2677 142 MobiDBLite consensus disorder prediction 21 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2677 Dod-Chr4 50738257 50741097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2677 49 135 WRKY Transcription Factor Family AT5G13080 78.161 2.55e-50 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod04g2677 WRKY 1.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2677 - - gmx:100127378 199.904