Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2663 ATGAAGAAACTGACAATAAAGCCGACAGACGAAGAGCTTGTGTTTCAGTACTTGAAATGTAAGGTCTTCTCCTGCCCCCTCCCAGCTTCCATCATTCCTGAGATCAATGTCTCCATGTACGATCCTTGGGATTTGCCAGGAAGCTGTGATCAGCAAGAGAGGTACTTTTTCAGCACCAAGGAAGCCAAGTATCGAAATGGAAGTCGCATGAACCGAACAACCAAATCTGGCTATTGGAAAGCAACAGGATCAGACAAAAAGATTTCTTCTTCAACGTGTGATGGTATTGTGGGGATAAGGAAAACCCTGGTCTTTTACCAAGGGAAATCTCCAAATGGGTCTCGAACTACCTGGGTCTTGCACGAATATCGCCTTGCCGGTGTAGAAACCAGTGCTTGCAACTCAACACAGAACTACGCAAACGAGATAGGAGATTGGGTTCTGTGTCGTTTATCGGTGAAGAAAACGAGTGTAGAAAGTGATGGCAGCAGCCCTCATCACATGCACAATACGCAAAACTCATCAGTTGGGGCTCTTCCAAGATTGTTCAATTTTATGATGGCAAGTAAGGCTCATTCTTCTACATCCTCATCATGTTCAAGCTCTAGTAACGTCATGGAAGCCTCATCATATGCGTCGGACCATGAAGAGACGAGTGGCTATGCTGATTCTTAA 675 0.4504 MKKLTIKPTDEELVFQYLKCKVFSCPLPASIIPEINVSMYDPWDLPGSCDQQERYFFSTKEAKYRNGSRMNRTTKSGYWKATGSDKKISSSTCDGIVGIRKTLVFYQGKSPNGSRTTWVLHEYRLAGVETSACNSTQNYANEIGDWVLCRLSVKKTSVESDGSSPHHMHNTQNSSVGALPRLFNFMMASKAHSSTSSSCSSSSNVMEASSYASDHEETSGYADS* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2663 224 MobiDBLite consensus disorder prediction 194 217 - -
Dod04g2663 224 Pfam No apical meristem (NAM) protein 6 125 IPR003441 GO:0003677|GO:0006355
Dod04g2663 224 Gene3D NAC domain 9 159 IPR036093 GO:0003677|GO:0006355
Dod04g2663 224 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 6 223 - -
Dod04g2663 224 MobiDBLite consensus disorder prediction 194 224 - -
Dod04g2663 224 SUPERFAMILY NAC domain 8 154 IPR036093 GO:0003677|GO:0006355
Dod04g2663 224 ProSiteProfiles NAC domain profile. 1 154 IPR003441 GO:0003677|GO:0006355
Dod04g2663 224 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2663 Dod-Chr4 50542317 50544149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2663 8 157 NAC Transcription Factor Family AT5G13180 61.333 3.03e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod04g2663 NAM 1.6e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2663 - - gmx:100812015 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2663 04 50542317 50544149 Dod09g0821 09 26110325 26111622 PCT