Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2658 ATGGGTTGCGCGCTCGGAACGCCGGCATTCCGCCGCCGCTCACGGCGGCATAGCGCTGACGCTGCTGAAAGAGGAAATGCCGTTATGGTTCGGCAGAGGCAGGGTACAAAGCCCGCCGGGGATTTTCCCAGCGACATTCCGGCGCCGGAGCCGCGGAGACCTCGGCTCGGTCCATCAGCGGTGAACCAACAGGGTTGGCCGCCGTGGTTGGTGGCGGTCGCCGGCGACGCCATCCGAGATTGGACTCCTCGCCGCGCCAACACCTTCGAGAAGCTTGCCAAGATTGGACAAGGGACTTATAGCAACGTGTACAAAGCGAGGGACCTTGTTAGTGGGAAGATAGTGGCATTGAAGAAAGTGAGATTTGATAATTTGGAGGCAGAGAGTGTGAAGTTCATGGCTAGAGAGATACTTGTTTTGAGGAGGCTTGATCATCCTAATGTTGTGAAACTTGAGGGCTTGGTTACTTCAAGAATATCAACCAGTCTTTACTTGGTGTTTGAGTACATGGAGCATGATCTTGCAGGCCTTTTAGCTGTTCAGGGTGCCAACTTCCCTGAGCCTCAGGTCAAATGTTATATGAAGCAATTACTATCTGGCCTTGAGCATTGCCACAGCAGAGGTGTATTGCACCGTGATATCAAGGGTTCTAATCTGCTCATTGACAATGAAGGAATCCTTAAAATTGCAGATTTTGGACTGGCGACTTTCTATGATTCTAAGCAAAAGCAACCCATGACAAGTAGAGTTGTGACCCTTTGGTATCGCCCCCCTGAGCTTCTTCTTGGGGCTACCTCGTATGGTGTTGGTGTTGACCTTTGGAGTGCTGGCTGCATCTTGGCAGAGCTGCTTTGTGGAAAGCCAACCATGCCTGGCCGAACAGAGGTTGAGCAACTGCACAAAATATTCAAGTTATGCGGCTCTCCATCTGAGGAATATTGGAAGAAATACAGATTGCCAAATACTACCCTCTTTAAGCCGCAACAGCCATATAAAAGATGCATCACTGAAACATTCAAGGACATTCCATCTTCTTCATTATCTCTAATTGATACCCTTCTTGCAATCGATCCTGTTGATCGCGGCACTACCTCAGCAGCTCTAAATAGTGAATTCTTTACCACTGAGCCGTGCGCTTGTGAACCATCGAGTTTACCAAAGTATCCTCCCAGCAAAGAACTAGATATGAAACTGAGAGATCAAGAAGCAAGAAGGCAGAAGGCGCTAAGCGGAAAAGCCATTGCAGTTGATGGTGCAAGAAGAGTTAGAGCACGGGAGCGTGGTTTGGCCATTCCAATCCCAGAAGCCAACGCAGAGACCCAAACAAACTTAGATAAGTGGAGAGTTGTGACACTTGCAAATGCCAAAAGCAAGAGTGAGAAGTTTCCACCTCCTCATCAGGATGGGGCTGTTGGATATCATCCATTGGATGCATCAAATAAGGGAACTGTTTCATTTGGTGCCACTCACACTTCCTTCAGCTCAGCCACATTTGATTCAAAACCTTCAGGATCTTTTGGAAGTAATGCTGCTGCTGGACCTTACAAAAGAAGGAAAACCAATAAAGCAGACTCCCAGATGGCTTCATCTTGGAAATTTATGCGTGCATTCAAGCCATCAACTGTTGGCCTTTCATTTGATTTATTATTTAGAAAGAAATAA 1662 0.4771 MGCALGTPAFRRRSRRHSADAAERGNAVMVRQRQGTKPAGDFPSDIPAPEPRRPRLGPSAVNQQGWPPWLVAVAGDAIRDWTPRRANTFEKLAKIGQGTYSNVYKARDLVSGKIVALKKVRFDNLEAESVKFMAREILVLRRLDHPNVVKLEGLVTSRISTSLYLVFEYMEHDLAGLLAVQGANFPEPQVKCYMKQLLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLATFYDSKQKQPMTSRVVTLWYRPPELLLGATSYGVGVDLWSAGCILAELLCGKPTMPGRTEVEQLHKIFKLCGSPSEEYWKKYRLPNTTLFKPQQPYKRCITETFKDIPSSSLSLIDTLLAIDPVDRGTTSAALNSEFFTTEPCACEPSSLPKYPPSKELDMKLRDQEARRQKALSGKAIAVDGARRVRARERGLAIPIPEANAETQTNLDKWRVVTLANAKSKSEKFPPPHQDGAVGYHPLDASNKGTVSFGATHTSFSSATFDSKPSGSFGSNAAAGPYKRRKTNKADSQMASSWKFMRAFKPSTVGLSFDLLFRKK* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2658 553 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 49 534 - -
Dod04g2658 553 ProSitePatterns Protein kinases ATP-binding region signature. 95 118 IPR017441 GO:0005524
Dod04g2658 553 Pfam Protein kinase domain 89 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2658 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Dod04g2658 553 ProSiteProfiles Protein kinase domain profile. 89 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2658 553 MobiDBLite consensus disorder prediction 1 60 - -
Dod04g2658 553 CDD STKc_CDK9_like 89 373 - -
Dod04g2658 553 SUPERFAMILY Protein kinase-like (PK-like) 82 377 IPR011009 -
Dod04g2658 553 Gene3D Phosphorylase Kinase; domain 1 75 171 - -
Dod04g2658 553 SMART serkin_6 89 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2658 553 MobiDBLite consensus disorder prediction 504 524 - -
Dod04g2658 553 MobiDBLite consensus disorder prediction 457 476 - -
Dod04g2658 553 Gene3D Transferase(Phosphotransferase) domain 1 172 413 - -
Dod04g2658 553 PANTHER CELL DIVISION PROTEIN KINASE 49 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2658 Dod-Chr4 50480420 50484464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2658 81 407 Core Cell Cycle Gene Families AT5G10270 49.854 7.47e-114 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dod04g2658 Pkinase 3.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2658 K08819 - gmx:100807756 895.96