Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2656 ATGGATGATGGCCAGCAGCATGAAAATGGCAGACATAAGATGGACTATAATAGAGGAGCACATTCCCTGTGGAATATGGATCCCCAGCATCAAGTAAAGGATCCGAATGCACTAGTTTTGAATAAAAAAATGAGGACCATCATGGCTGAAAGACAGGCTGCCATTCTAGAACTTGAACTAGAAGCTGCTATATCTGAAAAGAATGAAGCCTTGGCTGCTCGAGATTCAGCCCTCCGACAAAGGGATGAAGCACTTGCTCAGAGGGATAATGCCCTAATGGAACGGGATAATGCCCTTGTGGCCCTTCAAAATCAAAACAATGCAGTCAACTTCCCATTTGGTGGTGGAATTCATCGCAGATCAAACTGGATGCACCAAGCTGCATACAGCCCAAAGGATTTGCCAAGAAGGGATGCCTCCCTGAAGACTGCTATAGCTTCTGATGAAGCTGTCAAATCTCACCAAGCTGAGAAATCCAAGGAGGACAATGTGATTAATTCTAAGTCATCAAAGCCTTGCAAAATAAAGAAAATGGGTGAAGATTTAAATAGGCAGGCTTCCTCTGAAGGGATAAAGATCAAATCTGAATGGGATAGGCAGGATGTTGGCTTGAATTTGGTTACATTCGATGAAACTATTATGCAGGTCCCGGTATGCACATGCACTGGAGTACCTCAGCAATGCTACAAATGGGGAAATGGTGGATGGCAGTCATCTTGTTGCACCACCACATTGTCAATGTATCCACTACCACAGCTTCCAAACAAGCGCCATGCCCGCATCGGAGGGCGAAAGATGAGTGGAAGCGTCTTTACAAGACTGCTCAGTAGGTTGGCATCAGAAGGCCATGATGTATCCATACCATTGGATCTTAAGAACTACTGGGCCAGACATGGAACAAATCGCTACATTACTATCAAGTAG 924 0.4481 MDDGQQHENGRHKMDYNRGAHSLWNMDPQHQVKDPNALVLNKKMRTIMAERQAAILELELEAAISEKNEALAARDSALRQRDEALAQRDNALMERDNALVALQNQNNAVNFPFGGGIHRRSNWMHQAAYSPKDLPRRDASLKTAIASDEAVKSHQAEKSKEDNVINSKSSKPCKIKKMGEDLNRQASSEGIKIKSEWDRQDVGLNLVTFDETIMQVPVCTCTGVPQQCYKWGNGGWQSSCCTTTLSMYPLPQLPNKRHARIGGRKMSGSVFTRLLSRLASEGHDVSIPLDLKNYWARHGTNRYITIK* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2656 307 Coils Coil 53 73 - -
Dod04g2656 307 Pfam GAGA binding protein-like family 1 307 IPR010409 -
Dod04g2656 307 PANTHER PROTEIN BASIC PENTACYSTEINE4 1 307 - -
Dod04g2656 307 MobiDBLite consensus disorder prediction 148 167 - -
Dod04g2656 307 MobiDBLite consensus disorder prediction 151 167 - -
Dod04g2656 307 SMART GAGA_bind_2 1 307 IPR010409 -
Dod04g2656 307 PANTHER - 1 307 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2656 Dod-Chr4 50473249 50476312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2656 1 307 BBR or BPC Transcription factor family AT2G21240 55.844 4.89e-121 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Dod04g2656 GAGA_bind 7.5e-94 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2656 - - gmx:100813103 492.271