Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2655 ATGAAAGTACCCGGATCTGAATCCGAGCCCGAACCCGTGAAGCTTTGCATTGACCTCATCTCGTCTCTCCTGAACCAAATGATCCCATGCATTCAGAGCTTCAAGGGGAAGTGGTCCCTCATCGGAGCCACCCTCTCCAGCCTCCACTCCCAGCTCTCCGACTACTCCGCCGAGTTCCCCAACTGCTCCTCCAACCCACTCTCCCTCGACCTCCTCCGCTCCCTCTCCGCCACCCTCAACGACGCCGTCTCACTCGCCACCCACTGCCACTCCCCAAACCCCATCCACGGCAAGCTCAAGACCCAGAGCGACCTCCACTCCCTCCACGCCACCCTCTCCCGCCACCTCCACGACTCCCACATCCTCTTCCGCAGCGGCCTCCTCCACCAACCTAATCAAAACGACGCCGTCTCCTCCATCACCACCACCAACACGCGCGACTCCCTCCGATCCGAATCCAACAACCTCATAACCCGACTCCAAATCGGGTCGCCCGAGTCCCGAAAACCCGCAATGGACTCGCTTCTCTCTTTCCTCCAAGAGGAAGACAAGAACGTCGTCATAGCCGTGGCGCAGGGCGTGGTCCCCGTGCTCGTGCGCACACTCGATTCCACCTCCCCAGAAATGAAGGAGAAAACAGTGGCCGCCATTTCCAGAATCTCCACCGTTGACACCAGCAAGCACGTTCTCGCGGCGGAGGGCTTGCTTCTTCTCAACCACTTGCTCCGAGTCCTCGACTCCGGAAGCGGGTTCGCGAAGGAGAAAGCTTGCGTTGCGCTTCAAGCGCTGAGTTCCTCCTCGAAGGAGAACGCCAGGGCCATTGGTTCCCGCGGCGGAATCTCCTCCCTCTTGGAGATTTGCCAGGCTGGCACCCCCGGCTCCCAAGCCTCCGCCGCCGGGGTTCTCAGGAATTTATCGCGTTTCCCCGAGATAAAGGAAAATCTCGTCGAGGAAAACGCGGTTTTCGTTCTGTTGGGTCTTGCTTCTTCGGGTACCGCGTTGGCGCAAGAGAATGCCATTGCTTGCCTCTGCGGTTTAATCTCCGAGGACGAAAGCTTGAAGCTTTTGGTTGTTAGGGAAAATGGGGTGGAGTGTTTGAAGAATATCTGGGACACGGGTCGGAGCCCCGAGGTTGCTGTTGAGTTTCTCGGGCATTTGGCTTCGAATCCGCATGTTGCTGAGGTTCTTGTCTCTGATGGGTACGTTTTGCCACGTGTTGTCGGGGCTCTGAATTGCGGGGTGATGGCGCTGAGGATTTTGGCGGGTAGAGCGGTTTATGCTATGGCGTTGAGCAGCGCGAGGGCGAGGAAGGAGTTGGGTGAGTGCGGTGCTGTTGCCCCTTTGATCAAGATGTTGGTGGATGGGAAGGGCGTGGAGGAGAAGGAATCGGGTGCGAAAGCGTTGTCGGTGATGCTGTTGCATGCAGGGAATCGGAGGGTTTTCCGTAAGGACGAGAGGGGGATTGTGAGTGCGGTTCAGCTTTTGAACCCTTCGGTGCAGGGTTTGGATAAGAGGTACCCTGTTTCGTTGCTGGCTTCGCTCGTGCATTCCAAGAAGTGTAGGAAGCAGATGGTTGCCGCGGGTGCTTGTGTCTACACGCAGAAGCTCGTGGACTTGGATGTTGAGGGCTCCAAGAAGCTCTTGGGAAGCCTTGGTCGTGGAAAGATTTTGGGAGTTTTTTCTAGACCCTAG 1692 0.5739 MKVPGSESEPEPVKLCIDLISSLLNQMIPCIQSFKGKWSLIGATLSSLHSQLSDYSAEFPNCSSNPLSLDLLRSLSATLNDAVSLATHCHSPNPIHGKLKTQSDLHSLHATLSRHLHDSHILFRSGLLHQPNQNDAVSSITTTNTRDSLRSESNNLITRLQIGSPESRKPAMDSLLSFLQEEDKNVVIAVAQGVVPVLVRTLDSTSPEMKEKTVAAISRISTVDTSKHVLAAEGLLLLNHLLRVLDSGSGFAKEKACVALQALSSSSKENARAIGSRGGISSLLEICQAGTPGSQASAAGVLRNLSRFPEIKENLVEENAVFVLLGLASSGTALAQENAIACLCGLISEDESLKLLVVRENGVECLKNIWDTGRSPEVAVEFLGHLASNPHVAEVLVSDGYVLPRVVGALNCGVMALRILAGRAVYAMALSSARARKELGECGAVAPLIKMLVDGKGVEEKESGAKALSVMLLHAGNRRVFRKDERGIVSAVQLLNPSVQGLDKRYPVSLLASLVHSKKCRKQMVAAGACVYTQKLVDLDVEGSKKLLGSLGRGKILGVFSRP* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2655 563 Gene3D - 144 371 IPR011989 -
Dod04g2655 563 Pfam Armadillo/beta-catenin-like repeat 184 221 IPR000225 GO:0005515
Dod04g2655 563 Gene3D - 372 540 IPR011989 -
Dod04g2655 563 SUPERFAMILY ARM repeat 147 490 IPR016024 -
Dod04g2655 563 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 561 - -
Dod04g2655 563 SMART arm_5 267 307 IPR000225 GO:0005515
Dod04g2655 563 SMART arm_5 431 473 IPR000225 GO:0005515
Dod04g2655 563 SMART arm_5 308 348 IPR000225 GO:0005515
Dod04g2655 563 SMART arm_5 182 222 IPR000225 GO:0005515
Dod04g2655 563 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 2 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2655 Dod-Chr4 50448162 50449853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2655 156 455 U-box Gene Family AT1G23030 24.000 2.52e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2655 - - zju:107418090 676.396