LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod04g2646	ATGGCAATGGCTATGGTGTTGATTCTGCTGAGTTTTGCCATGGAGATCTTCTGCCTCTCTTCTCATACAGATAGAATTTCTAAGCTTCCTGGACAACCCCACGTGGGCTTCCAACAGTTCTCAGGATATGTTACAGTAGATGACAAGAAACACAAGGCTCTCTTTTACTATTTTGTTGAATCAGAAACTGATCCATCTTCAAAGCCTCTTGTCCTTTGGCTCAATGGAGGACCTGGTTGTTCTTCTTTGGGAGTGGGAGCATTCTCTGAAAATGGACCTTTCAGACCAAATGGGGAAGCTCTGACAAACAATGAGTATAGCTGGAACAAAGAGGCAAACATGTTGTATTTGGAAACACCAGTTGGAGTGGGGTTCTCTTATGGTAAAGGTAGCTCCTCCTATGTCACAGTGAATGACGAGAAAACAGCCAGGGACAATCTTGTATTCTTGCAACGCTGGTTCAACAAGTTCCCTCAATACAGGCACAGAGATTTGTTTCTAACAGGAGAAAGTTATGCAGGGCATTATGTTCCACAACTTGCAAAGCTCATGATTGAAATCAACAAAAAGGAGAAGATATTCAATCTGAAAGGCATAGCTTTGGGTAATCCAGTTCTGGAATATGCCACTGACTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCACGGTTTAATATCAGATTCAACGTACCAAATGTTCACCACAGGTTGTAACTATTCTAGGTATGTCAGTGAGTACTATAGAGACTCAGTTTCGGCCATTTGCTCAAAGGCTATGAGCCAAGTAAGCAGAGAAACCAGCAAATTTGTGGACAAATACGATGTCACCCTTGATGTTTGCATCTCCTCAGTGCTTTCACAATCCAAAGTTATTTGTCCTCAAGCCCAACAAGCAAATGAGAGCATAGATGTGTGTGTAGATGACAAAGTTACAAATTACTTAAACCGAAGAGATGTACAGCAAGTTCTCCATGCCAAGCTTGTTGGAGTTCGCAAGTGGGACGTCTGCAGCAACATCCTTGACTATGATATGCTCAACCTGGAATTGCCTACACTGCCTGTTGTTGGATCACTCATAAAAGCTGGAGTTCGGGTCTTAATTTACAGTGGGGATCAAGATTCAGTGATTCCACTGACAGGAAGCCGCACCTTGGTTCAAAAGCTGGCAAGACAATTAGGACTGAATACAACAGTCCCTTACAGAGTATGGTTTGAAGGCCAGCAGGTTGGTGGATGGACTCAGGTTTATGGCAATATCCTCTCATTTGCTACCATCAGAGGTGCCTCCCATGAAGCCCCTTTCTCACAGCCTGAAAGATCACTTGTTTTATTCAAGTCATTCTTGGAAGGCAGGCCTCTACCTAAAATTTTCTAA	1374	0.4309	MAMAMVLILLSFAMEIFCLSSHTDRISKLPGQPHVGFQQFSGYVTVDDKKHKALFYYFVESETDPSSKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEALTNNEYSWNKEANMLYLETPVGVGFSYGKGSSSYVTVNDEKTARDNLVFLQRWFNKFPQYRHRDLFLTGESYAGHYVPQLAKLMIEINKKEKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYQMFTTGCNYSRYVSEYYRDSVSAICSKAMSQVSRETSKFVDKYDVTLDVCISSVLSQSKVICPQAQQANESIDVCVDDKVTNYLNRRDVQQVLHAKLVGVRKWDVCSNILDYDMLNLELPTLPVVGSLIKAGVRVLIYSGDQDSVIPLTGSRTLVQKLARQLGLNTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKSFLEGRPLPKIF*	458

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod04g2646	457	PANTHER	CARBOXYPEPTIDASE	18	455	-	-
	Dod04g2646	457	PRINTS	Carboxypeptidase C serine protease (S10) family signature	420	433	IPR001563	GO:0004185\|GO:0006508
	Dod04g2646	457	PRINTS	Carboxypeptidase C serine protease (S10) family signature	117	127	IPR001563	GO:0004185\|GO:0006508
	Dod04g2646	457	PRINTS	Carboxypeptidase C serine protease (S10) family signature	153	178	IPR001563	GO:0004185\|GO:0006508
	Dod04g2646	457	PRINTS	Carboxypeptidase C serine protease (S10) family signature	104	116	IPR001563	GO:0004185\|GO:0006508
	Dod04g2646	457	Pfam	Serine carboxypeptidase	31	450	IPR001563	GO:0004185\|GO:0006508
	Dod04g2646	457	Gene3D	alpha/beta hydrolase	21	282	IPR029058	-
	Dod04g2646	457	ProSitePatterns	Serine carboxypeptidases, serine active site.	167	174	IPR018202	GO:0004185
	Dod04g2646	457	Gene3D	-	305	341	-	-
	Dod04g2646	457	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	18	455	IPR001563	GO:0004185\|GO:0006508
	Dod04g2646	457	ProSitePatterns	Serine carboxypeptidases, histidine active site.	420	437	IPR033124	GO:0004185
	Dod04g2646	457	Gene3D	-	351	450	-	-
	Dod04g2646	457	SUPERFAMILY	alpha/beta-Hydrolases	27	454	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod04g2646	Dod-Chr4	50351392	50354389	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod04g2646	313	453	Calmodulin-binding Proteins	AT2G22960	28.369	6.07e-16	74.3

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod04g2646	K16297		-	gmx:100795668	842.417