Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2635 ATGATTTTGCGTGTGTATACAGCAAACATAATAAGAAGACACTATAGAGGAGTGAGGCACCGGCCATGGGGCAAGTGGGCAGCAGAGATCCGTGATCCAAACAAGGCAGCGAGGGTTTGGCTTGGAACCTTTGACACTGCTGAGGCGGCAGCGCTTGCATACGATGAAGCAGCTCTCAAATTCAAAGGAAGCAAAGCCAAGCTCAATTTTCCTGAAAGGGTTCAACTCACTGCAGGTGAATTTGGTTACCTCACAAATCGTCAAGAATCCCAAGCTATGTCAAGCAGTGGCAATAGTGAACAAGCACCTACCACAATTGGTCATGCTCCGAGTTCACAATTTTCACTAGAAACAAATTCAAGTCCTTTGCAATATGCACAAATTTCTGGCAGTGGGAGTAACAACAACAGTTATGCTATGCCTCGTTTCGATTGGGCTGACACGTTTGTCTCTTCTCGTCCCTTATCCGCTTCCTCTTTGTCTTCGTCATCGTCATCATCTTCTGGATTATCTCAACGACAAGAAGAGCTTCCAAGATTTTCGATGCAATTTGGAGGTTCTTCTTCTACTACTTCTCCTTCTGAGCCTCCTAGGAATTGGACTAGTGAATGGGACGATAAACGTTGA 627 0.453 MILRVYTANIIRRHYRGVRHRPWGKWAAEIRDPNKAARVWLGTFDTAEAAALAYDEAALKFKGSKAKLNFPERVQLTAGEFGYLTNRQESQAMSSSGNSEQAPTTIGHAPSSQFSLETNSSPLQYAQISGSGSNNNSYAMPRFDWADTFVSSRPLSASSLSSSSSSSSGLSQRQEELPRFSMQFGGSSSTTSPSEPPRNWTSEWDDKR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2635 208 Pfam AP2 domain 14 63 IPR001471 GO:0003700|GO:0006355
Dod04g2635 208 MobiDBLite consensus disorder prediction 156 199 - -
Dod04g2635 208 SMART rav1_2 14 77 IPR001471 GO:0003700|GO:0006355
Dod04g2635 208 ProSiteProfiles AP2/ERF domain profile. 14 71 IPR001471 GO:0003700|GO:0006355
Dod04g2635 208 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 11 197 - -
Dod04g2635 208 MobiDBLite consensus disorder prediction 90 116 - -
Dod04g2635 208 Gene3D AP2/ERF domain 13 73 IPR036955 GO:0003700|GO:0006355
Dod04g2635 208 PANTHER DNA-BINDING DOMAIN 11 197 IPR044808 GO:0003700|GO:0009873
Dod04g2635 208 SUPERFAMILY DNA-binding domain 14 72 IPR016177 GO:0003677
Dod04g2635 208 MobiDBLite consensus disorder prediction 156 208 - -
Dod04g2635 208 CDD AP2 14 72 IPR001471 GO:0003700|GO:0006355
Dod04g2635 208 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Dod04g2635 208 PRINTS Ethylene responsive element binding protein signature 37 53 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2635 Dod-Chr4 50205711 50207352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2635 8 87 AP2-EREBP Transcription Factor Family AT5G61890 78.750 1.63e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Dod04g2635 AP2 8.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2635 - - mesc:110616899 160.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2635 04 50205711 50207352 Dod09g0079 09 1094294 1097137 PCT