Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2602 ATGGACAAGTACGAGGTTGTCAAGGATTTGGGAGCTGGGAATTTTGGGGTGGCTAGGCTCATGAGGAACAAGGAAACCAAGGAGCTCGTTGCCATGAAATACATCGAGCGTGGCCTCAAGATTGATGAGAATGTGGCTAGAGAGATTATCAACCACAGGTCCCTTCGGCACCCCAATATAATTCGCTTCAAGGAGGCAAGGACCTTATTTGTGGTTTTGACCCCAACCCACTTAGCAATAGTGATGGAGTATGCTGCTGGTGGAGAGCTCTTTGAGAGGATTTGCAATGCTGGCAGGTTCAGTGAAGATGAGGCTAGATATTTCTTTCAGCAGCTGATTTCTGGTGTCCATTACTGTCATGCTATGCAAATATGCCACAGAGATTTGAAGCTAGAAAACACCCTTTTAGATGGAAGCCCTGCTCCCCGCTTGAAGATTTGTGACTTCGGTTATTCCAAGTCATCTTTGCTTCATTCAAGACCTAAATCAACTGTTGGAACTCCAGCATATATAGCACCGGAGGTTCTTTCTAGGAGGGAGTATGATGGCAAGTTGGCTGATGTATGGTCATGTGGAGTGACTCTTTATGTCATGCTGGTTGGAGCATATCCCTTTGAGGATCAGGATGACCCTAGGAATTTTAGGAAAACAATTCAGCGTATAATGGCTGTTCAATACAAAATCCCTGATTATGTTCACATATCTCAGGACTGCAAACACCTCCTTTCTCGTATATTTGTTGCAAATCCATTGAGGAGAATCACTCTCAAGGAAATCAAGAACCACCCATGGTTCTTAAAGAACCTTCCAAGGGAGCTAACTGAATCAGCTCAAGCTGTGTATTACCAGAGAGGCAACCCAAGCTTTTCTGTTCAAAGTGTGGAGGAGATAATGAAGATTGTGGGAGAGGCAAGAGACCCTCCTCCGGTGTCCAGGCCCGTCAAAGGTTTTGGGTGGGAAGGCGAAGAAGAAGAAGAAGGGGAAGAAGACGTCGACGCGGAGGTGGAGGAAGAGGAGGATGAGGAAGATGAGTATGACAAGAGGGTCAAGGAGGTTCATGCAAGTGGAGAATTCCAAATCAGTTAA 1086 0.4576 MDKYEVVKDLGAGNFGVARLMRNKETKELVAMKYIERGLKIDENVAREIINHRSLRHPNIIRFKEARTLFVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVHYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHISQDCKHLLSRIFVANPLRRITLKEIKNHPWFLKNLPRELTESAQAVYYQRGNPSFSVQSVEEIMKIVGEARDPPPVSRPVKGFGWEGEEEEEGEEDVDAEVEEEEDEEDEYDKRVKEVHASGEFQIS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2602 361 SUPERFAMILY Protein kinase-like (PK-like) 1 296 IPR011009 -
Dod04g2602 361 ProSiteProfiles Protein kinase domain profile. 4 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2602 361 SMART serkin_6 4 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2602 361 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Dod04g2602 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Dod04g2602 361 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2H 2 354 - -
Dod04g2602 361 MobiDBLite consensus disorder prediction 321 345 - -
Dod04g2602 361 Gene3D Transferase(Phosphotransferase) domain 1 85 273 - -
Dod04g2602 361 PANTHER SERINE/THREONINE KINASE 2 354 - -
Dod04g2602 361 Coils Coil 328 355 - -
Dod04g2602 361 Gene3D Phosphorylase Kinase; domain 1 1 84 - -
Dod04g2602 361 CDD STKc_SnRK2 3 264 - -
Dod04g2602 361 Pfam Protein kinase domain 4 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2602 361 MobiDBLite consensus disorder prediction 308 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2602 Dod-Chr4 49924329 49928059 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2602 3 268 CBL-interacting serine-threonine protein kinases AT4G24400 42.545 1.76e-65 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Dod04g2602 Pkinase 2.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2602 K14498 - gmx:547968 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2602 04 49924329 49928059 Dod04g2602 04 49924329 49928059 ECH