Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2598 ATGCCTCTTTTAAGGAGAAAGCCTTTTGCCTTGGCTGAGCCACCTAAGGATTTGAAGCTAGATGAGCATGTTTATCAAATTCGATTTACAAAGGAAATATTTCGAGATTATCATGATTATTTGAATCGTATAAATCTATACCGCCAGAGGATTTGGATGTGCAAAGTCACTGGAAAAACCAATTTGACTTATGAGGAGGCCTTGGTGTCAGAAAAAAGTGCCACAGAAAAAATTCAACAGTTTCCTACAGAATTAAGGGCTCCTGCTTTAAGGATTATTCAGTACAGTATGCTCCCTTTGAAGGATCTTGCTGATTCTATTGCTGAAAAATTGCAGGAACGTTTGTTTGTGGGTGCTGAACTGCATGGGAAAAAGGATGATGAATTATGTCCGTGCAAAATATTAAAAGTCATCCAGAAAGGTGCTGACAAGTTCTGTTATGAGGTAGCTTGGCTCAACAAAGACAAGAATATAAGTGGAAAAGCAGAAGTGATTGCGGAGGATTTGGTACTAAAGAAGCCACTATTTAGTAGAAATATGCTGAAGTCTTTTATCCGGGAATCCACGTATCGGAATGCCCCTTGGGTTTTACATGATGAAGTAGCACAAAATCATGGAATCTCAAGTGACATTCCTGAGGAGTTAAGAGGAAGGGTTTTCTTCAAAAACGGACTTTTAAGCTGCTCCAAGAAAAGGAAAAATGAGGAATCAATGGAAGGAACTGAAAACTGTAAAAAGAAGTTGGATAGTGCACAATCTGATGGTTCTACCCAAGAGAAAGAAAATGGCCAGCACAAAGATGAACCAATCAAATATCCAATTGACGATCTACTGGTGAAACCCAGTCCCCGTGATCCTTCTATCACTGATCGACCTTCTCCATCAAGAGACTTCAATGTTCCAATGCATTGTGTGGGGGATCTCTTAATGGTTTGGGATTTTTGTACTTCTTTTGGTAAAATGTTGCACTTGTGGCCCTACTCTCTAGAAGATTTTGAAAATGCAATCTGCCACAAGGATAGCAATGTTGTTCTCCTTGTGGAGTCTCATGCAGCTCTGTTTCGGGTTCTCATAAAAGATGATGGTGAATACTTTTCGTCTGTAAAGAAGCGAAAGATTACAATGGTTAATTGGACAGAATATCTATGTGATTTTCTAGAAATGATCAATGTTCCTGGACTACAGCAACATGAAGCAACCATAAAACGGGGACATTATGGCCTTGTAGATACCAATGTTAAATTAAGCATTTTATGTGAATTGGTCAATCGAGTTCTTGAAACTGCAATTTTCAGGGAAAAGTTGGATGAGATTATTGAGCAGCGGCAGGCGCTAGGGGCCACTAGAAGGGAAGAAGCACTGAAAGATGCTAGGGATAGAAGAAAAGAAAAGGAGCTGTTGAAAGCTGAGTCTGAGAGCAATGAAATTGTGGATGGGCATCATCTAAACAGTGCAAATGTCTCAGCAAACAATAATCACAGAATACAAAATGGAGATGTGGGTGCGAAAAGAAATGGAGAGATAGAACCATGTAGCCAATACGATGCAGTGGGAAGGTTAGGTTTTATCATGGGTGCTGTTTCTGCTGACCTTTTGTGTATATCTACTTATCTAGAACTAGAAATCACATTCTTTTTGTTTGACAGTTATTGCATTTCACTTTTTTCTCCTTTTAAAAAATCAATTTGCAGCGAGACCAAGCATTCAAATCCTGCTTCAAAAAAGTCACCTAAGAAGCTGAATTTAGATATGAAAGAACCAGCAGAAAATGGAAAATTATCCAGAAAAGAATTACTGAAAAAATTGAGGGATGATAAGGATCCATCAGAGAAGAACAGTAAAAATCAGAGGAGAGAATATTTTGAACGGGAGATGGAGAAACGGTTAATTCGTAGAAGCCCATTAGGCAAGGACCGACACTATAATAGGTATTGGTGGTTGCGCCGTGATGGGAGGATATTTGTTGAAAGTTCTGACTCTAAGGAGTGGGGATACTACAGCTGCAAGGAAGAGCTTGATGCATTGATGGGGTCACTGAATTGCAAGGGTGAGCGGGAAAGGGCACTTCGAAAACAACTGGAAAAATATTATAGTAGAATATGCTCAGAGCTCCAAAAAAGATCAAAAGATGTAATGCACAAGATTGCAATGGATGAGTCTGTGCTTCGAAGATCTACACGAGTTCGAGCTCCACCTAGACTAAACCCTGCCAATGCTTTCCTCAGGTATGTTAACAAGTGGAAAGAAGACTAG 2253 0.3955 MPLLRRKPFALAEPPKDLKLDEHVYQIRFTKEIFRDYHDYLNRINLYRQRIWMCKVTGKTNLTYEEALVSEKSATEKIQQFPTELRAPALRIIQYSMLPLKDLADSIAEKLQERLFVGAELHGKKDDELCPCKILKVIQKGADKFCYEVAWLNKDKNISGKAEVIAEDLVLKKPLFSRNMLKSFIRESTYRNAPWVLHDEVAQNHGISSDIPEELRGRVFFKNGLLSCSKKRKNEESMEGTENCKKKLDSAQSDGSTQEKENGQHKDEPIKYPIDDLLVKPSPRDPSITDRPSPSRDFNVPMHCVGDLLMVWDFCTSFGKMLHLWPYSLEDFENAICHKDSNVVLLVESHAALFRVLIKDDGEYFSSVKKRKITMVNWTEYLCDFLEMINVPGLQQHEATIKRGHYGLVDTNVKLSILCELVNRVLETAIFREKLDEIIEQRQALGATRREEALKDARDRRKEKELLKAESESNEIVDGHHLNSANVSANNNHRIQNGDVGAKRNGEIEPCSQYDAVGRLGFIMGAVSADLLCISTYLELEITFFLFDSYCISLFSPFKKSICSETKHSNPASKKSPKKLNLDMKEPAENGKLSRKELLKKLRDDKDPSEKNSKNQRREYFEREMEKRLIRRSPLGKDRHYNRYWWLRRDGRIFVESSDSKEWGYYSCKEELDALMGSLNCKGERERALRKQLEKYYSRICSELQKRSKDVMHKIAMDESVLRRSTRVRAPPRLNPANAFLRYVNKWKED* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2598 750 MobiDBLite consensus disorder prediction 564 587 - -
Dod04g2598 750 ProSiteProfiles WAC domain profile. 22 128 IPR013136 -
Dod04g2598 750 ProSiteProfiles DDT domain profile. 302 363 IPR018501 -
Dod04g2598 750 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 24 120 IPR013136 -
Dod04g2598 750 SMART testlast3 302 363 IPR018501 -
Dod04g2598 750 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 630 696 IPR028941 -
Dod04g2598 750 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 748 - -
Dod04g2598 750 MobiDBLite consensus disorder prediction 236 269 - -
Dod04g2598 750 Coils Coil 450 474 - -
Dod04g2598 750 Pfam DDT domain 303 360 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2598 Dod-Chr4 49891262 49898118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2598 609 695 Homeobox Transcription Factor Family AT1G28420 35.417 5.64e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Dod04g2598 WAC_Acf1_DNA_bd 8.6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2598 - - gmx:100789956 1017.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2598 04 49891262 49898118 Dod04g2598 04 49891262 49898118 ECH
Dod04g2598 04 49891262 49898118 Dod09g0036 09 604167 615686 PCT