Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2587 ATGTTTCGCTCAAATTTTAGCTGTGATCATCTCAAAATATTGACGAGGTGGCTGATATTCCTTGGTGTCCTGAAACTCACTTATGCATCCCAAGATCCTGATGTAGAAGGTGAAGCACTGCTTGATTTTTTGAAGAACCTCAATGATTCCAATAATCAAATAAAAGACTGGGATAGTCATTTAGTGAGCCCATGCTTCAGTTGGTCTCATGTCACTTGTAGAAATGGCCATGTCATATCTGTGGCCCTGGCTTCGATTGGATTCACTGGAACACTTTCTCCCTCAATTGTCAAGTTGAAATATTTGGTTACTTTGGAATTGCAGAACAACAATCTTTCAGGCTCCTTACCTGATTATATTGCCAACTTGACTGACCTACAATATCTAAACCTTGCTGGCAATAATTTCAATGGCCCTATACCGGCTACATGGGGTCAACTTTCCAGTCTTAAGCATGTGGATCTTTCGTCAAATGGTCTTAGTGGTAGTATCCCAACGCAACTCTTTTCAGTTCCAATGTTTAACTTTTCAGATACACAGCTTCATTGTGGTTCTAGCTTGGAGCAACCATGTGTTTCAACATCTGATCATCCAGCTTCAACCAACAAATCAAAACTTACAAAGGTTGTACAGTTTGCAAGTTTTGGGGCATTTGCACTTCTGTGTCTTGGGGCTATCTGCACATATAGATACCATCAAATGCGTAGAAACATCACTGATGTCTTTGTTGATGTTTCAGGTGAAGATGAGAGCAAAATTCCTTTTGGGCAATTGAGAAGATTTTCATGGCGTGAACTCCAATTAGCTACTAAAAATTTCGGTGAAAGCAATGTAATTGGCCAGGGAGGCTTTGGAAAAGTTTACAAGGGGGTACTCTTAGATAATACAAAAGTTGCTGTAAAACGCCTCAGTGATTATCATAATCCTGGTGGAGAGGCTGCATTTTTGAGAGAAGTTCAACTCATAAGTGTTGCAGTTCATAGAAATCTCCTAAGGCTAATTGGATTCTGTATAACCTCAACTGAAAAGATCCTTGTATATCCTTTCATGGAAAATCTAAGCGTAGCACATCGACTTAGAGATTTAAAACCTGATGAGAAAGGTTTGGACTGGCCAACAAGGAAACGTGTGGCTTTCGGTACAGCTCACGGTTTGGAATACCTACACGAGCAATGCAATCCTAAGATAATACATCGCGATCTAAAGGCAGCAAATATCCTTCTAGATGATGACTTTGAAGCTGTTCTAGGTGATTTTGGACTAGCCAAGCTGGTTGATACAAGGATGACTCATGTCACCACACAAGTGCGGGGCACAATGGGTCATATTGCCCCAGAATATTTGTCAACTGGGAAATCATCAGAGAAAACAGATGTTTTCGGATATGGCATAACACTACTTGAACTAATCACTGGCCAGCGTGCAATAGACCTCTCTCGGCTTGAAGAAGAGGAGGATGTCCTTCTGATTGATCATGTCAAAAAGCTACTGAGTGAAAATAGGCTGGAGGACATAGTGGATAAAAATCTGGAGAGTTATGATCCAAAAGAAATAGAGACAATTCTTCAGGTTGCATTGCTTTGCACACAAGGCTATCCCGAGGATCGTCCAACCATGTCAGAGGTTGTGAAAATGCTGCAGGGAGTGGGTTTGGCAGATAGATGGGCTGATTGGAAGCAACTTGAGGAGGCTAGGAATCAAGAATTGTCACTCATGACTCACCAATTTGTTTGGAGCGATGAGTCCACCCATGATCAAGAGGCTATACAGCTTTCCAGAGCGAGATAG 1788 0.415 MFRSNFSCDHLKILTRWLIFLGVLKLTYASQDPDVEGEALLDFLKNLNDSNNQIKDWDSHLVSPCFSWSHVTCRNGHVISVALASIGFTGTLSPSIVKLKYLVTLELQNNNLSGSLPDYIANLTDLQYLNLAGNNFNGPIPATWGQLSSLKHVDLSSNGLSGSIPTQLFSVPMFNFSDTQLHCGSSLEQPCVSTSDHPASTNKSKLTKVVQFASFGAFALLCLGAICTYRYHQMRRNITDVFVDVSGEDESKIPFGQLRRFSWRELQLATKNFGESNVIGQGGFGKVYKGVLLDNTKVAVKRLSDYHNPGGEAAFLREVQLISVAVHRNLLRLIGFCITSTEKILVYPFMENLSVAHRLRDLKPDEKGLDWPTRKRVAFGTAHGLEYLHEQCNPKIIHRDLKAANILLDDDFEAVLGDFGLAKLVDTRMTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELITGQRAIDLSRLEEEEDVLLIDHVKKLLSENRLEDIVDKNLESYDPKEIETILQVALLCTQGYPEDRPTMSEVVKMLQGVGLADRWADWKQLEEARNQELSLMTHQFVWSDESTHDQEAIQLSRAR* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2587 595 Gene3D Transferase(Phosphotransferase) domain 1 350 565 - -
Dod04g2587 595 SUPERFAMILY Protein kinase-like (PK-like) 251 547 IPR011009 -
Dod04g2587 595 SUPERFAMILY L domain-like 36 172 - -
Dod04g2587 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672|GO:0006468
Dod04g2587 595 Gene3D Phosphorylase Kinase; domain 1 242 349 - -
Dod04g2587 595 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Dod04g2587 595 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 11 595 - -
Dod04g2587 595 Gene3D Ribonuclease Inhibitor 33 197 IPR032675 -
Dod04g2587 595 ProSiteProfiles Protein kinase domain profile. 273 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2587 595 SMART serkin_6 273 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2587 595 Pfam Protein kinase domain 276 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2587 595 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Dod04g2587 595 ProSitePatterns Protein kinases ATP-binding region signature. 279 301 IPR017441 GO:0005524
Dod04g2587 595 PANTHER LRR RECEPTOR-LIKE KINASE 11 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2587 Dod-Chr4 49747966 49752832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2587 33 595 Receptor kinase-like Gene Family AT5G10290 56.007 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Dod04g2587 Pkinase 1.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2587 - - gmx:100800886 1023.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2587 04 49747966 49752832 Dod04g2587 04 49747966 49752832 ECH