Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2573 ATGGGTCGAGAAAATGTGTCAGCGACAGCAAACGAAGAACCCAGTGATGAAGATTCTTCGTCAAGTGTTGAGAGTGGGGATTTAGAGTCTCAATCTCGGCCTAGCCTGGAGAAGGAAATGGGCTTGCCGAGTTGTCGTGTGTGCCAATGTGCTGAATCTGATAAAAGGGGAGATGCTGCCCTGGAATTTTTGGGCATCACCCCCGTTATAGAAGCGTGTAAAAACAATGGGGAAGTAAGTTCTGATGGCAAGGGAATTTCGAAAAATATGTCTCTTAACAGAAATGCTGAAAACAAATCTGGGGTGGTGGAATTTGTAGGCCCTGATGGGGAGGTTTTTACTTGTAGAAGTGATTTGGAAATTGGTTTGTCTCATCAAGATACATTAGTTGAACTTGGTTGTTGCTGTAAAAATGACCTTGCTTTAGTACACTATGCTTGTGCACTCAAGTGGTTTGTTAACCATGGATCAACAATTTGTGAAATATGTGGACACATTGCCAATAATATCAGGATTTCTGACTTCAACAAGGTTGTCGGTTCTTTGAAGGAGTATGAAGCATTGAGGGAAAGAACTGCCAGCGGGGATCCCGGTCCTGCACAAGTTCATTCAAATAATGGGGTGGATCCTGATGCCGTGGCTGCTATCCGCAGGCAACGGCTAAGTGAGATTGCACTGTGGTTTTGTCCTCATAATAGCAGTATCAACACCAATAGCAACTTGGACACAGTTTCACAGGTTGTTTCTGAGCAGCCTTCGAATGTTGTTGCTGAAGATGCCGGCCCTGCTCAGAATCCTGCAACCAAGTGGGCGGTGGAAGGTACTGGGATCCTACTTGCTACTGGGCTGCTTACCATTACCCTTGCATGGCTCATAGCTCCTCGCGTCGGAAAGAAAACAGCCAAAAGTGGTCTTCATATCCTGCTTGGAGGTGTTTGTGCTTTAACAGTGGTGATTTTCTTCCGCTTTTTTGTGCTTACCAGAATCAAGTATGGACCTGCACGTTATTGGGCAATCTTGTTCGTTTTCTGGTTTCTTGTCTTTGGAATATGGGCTTCACGGACCCATGGTGCCCATACAACGTGA 1086 0.4549 MGRENVSATANEEPSDEDSSSSVESGDLESQSRPSLEKEMGLPSCRVCQCAESDKRGDAALEFLGITPVIEACKNNGEVSSDGKGISKNMSLNRNAENKSGVVEFVGPDGEVFTCRSDLEIGLSHQDTLVELGCCCKNDLALVHYACALKWFVNHGSTICEICGHIANNIRISDFNKVVGSLKEYEALRERTASGDPGPAQVHSNNGVDPDAVAAIRRQRLSEIALWFCPHNSSINTNSNLDTVSQVVSEQPSNVVAEDAGPAQNPATKWAVEGTGILLATGLLTITLAWLIAPRVGKKTAKSGLHILLGGVCALTVVIFFRFFVLTRIKYGPARYWAILFVFWFLVFGIWASRTHGAHTT* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2573 361 ProSiteProfiles Zinc finger RING-CH-type profile. 107 170 IPR011016 GO:0008270
Dod04g2573 361 SUPERFAMILY RING/U-box 126 166 - -
Dod04g2573 361 Pfam RING-variant domain 130 163 IPR011016 GO:0008270
Dod04g2573 361 SMART ringv_2 114 164 IPR011016 GO:0008270
Dod04g2573 361 PANTHER ZINC FINGER, RING-CH-TYPE 13 360 - -
Dod04g2573 361 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 173 IPR013083 -
Dod04g2573 361 MobiDBLite consensus disorder prediction 1 16 - -
Dod04g2573 361 MobiDBLite consensus disorder prediction 1 38 - -
Dod04g2573 361 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 13 360 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2573 1 351 C3H Transcription Factor Family AT5G08750 63.361 4.09e-152 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2573 - - gmx:100805323 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2573 04 49623627 49626635 Dod04g2573 04 49623627 49626635 ECH