Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2572 ATGAAGAGCCTCTGTCTTGGGCCGTTCCTTGTAGCTAGTGCCCCGGTTGGAAGCAGAGCCTTTTCTGACCACTTAACCAGAAGGTGCTTTGGCAAGCAACTTCACTTCCACTCCCGCAGTGTTGTTTTCTCCTCATTCTCATGTTCTGCAACTCTATCTATGGTGCCACAATTAGAGGAGAAGAAGCAAATATTTGATGGAGAGAAGGCTTCTTTGCTTGTTAAAGAGCTCAGAAAGAGCTTTGATTCAGGCAGAACAAAGAGCTATGAATGGCGAATTTCCCAGTTGCAGGGCATAGCTAAGATGCTAGAAGAGAAGGAGAAGGAAATTATTAATGCTCTTGATAAGGACCTTTCTAAGCCAGGACTGGAAGCATTTATAGCTGAGATTTCCCAGACAAAATCCTCATGCAGTGAAGCACTTCAAGAACTGAAACACTGGATGAAGCCTGAAAAGGTGAAAACTTCAATCACAACATATCCATCATCAGCTGAGATAGTTTCCGAACCACTTGGAGTTGTTTTGGTCATCTCAACATGGAACTTTCCTTTCTTGTTATCACTTGATCCTGTCATTGGAGCCATTTCAGCGGGTAACGCAGTGGTCTTGAAACCATCAGAAATTGCTCCAGCAACGTCATCACTGCTGGTGAATTTGCTTGAAAATTATCTAGACAACTCTGCGGTAAGAGTTGTTGAAGGGGCTATTCCTGAAACAACTGCACTCTTGGAGCAGAAGTGGGATAAGATACTTTACACAGGCAGTGCTAGAGTAGGTCGCATTGTCATGGCTGCTGCTGCAAAGCACCTTACACCGGTGATTCTGGAACTTGGAGGGAAATGCCCAGCTGTTGTTGACTCAGATGTCAACTTACAAGTTACTGCTAGGAGGATAATATATGGCAAGTGGGCATGCAATAGTGGCCAAGCATGCATCGGTGTCGATTATGTCATCACAAGAAAAGAATTTGCTCCAACACTGATAAATGCTTTAAAAGAAGAGTTGGAACAATTCTTTGGGAAAAATCCTCTGGAATCAAAAGACATGTCACGGATTGTGTCTCCAACCCAGTTTGCACGGCTCGTGAAGCTCTTGGATGAGAATAAGGTATCAGACAAAATTGTTTTAGGAGGTCAAAGGGATGAGAAGAAATTAAAGATTGCTCCAACTATCTTATTGGATGTTCCAGAAGAGGCTATGGTAATGCAGGAGGAGATATTTGGGCCAATATTGCCAATTATCACTGTAGAAAACATAGAAGATAGCTTCGGTATAATCAAATCAAAGCCAAAACCTCTTGCTGCATATCTCTTCACAAACAATGAGCAGCTGAAGAAGGATTATGTGGAGAAGATATCTTCTGGAGGGATGCTTGTCAATGACACTATCCTGCATGTTGCAACTCGGGGTTTGCCTTTTGGAGGAGTTGAAGAGAGTGGAATGGGTAGTTACCACGGAAAATTCTCTTTTGATAGTTTCAGCCATAAGAAATCCGTCCTCTATAGAAGTTTTGAGGCAGATTCATCCTTAAGGTACCCTCCATATACACCTGAGAAGGAAAAATTGTTGAAGGCCCTTATCAGTGGCAATATTTTTCGCATAATTGTTACTTTGCTTGGATGGTCTAAAGAATGA 1635 0.4245 MKSLCLGPFLVASAPVGSRAFSDHLTRRCFGKQLHFHSRSVVFSSFSCSATLSMVPQLEEKKQIFDGEKASLLVKELRKSFDSGRTKSYEWRISQLQGIAKMLEEKEKEIINALDKDLSKPGLEAFIAEISQTKSSCSEALQELKHWMKPEKVKTSITTYPSSAEIVSEPLGVVLVISTWNFPFLLSLDPVIGAISAGNAVVLKPSEIAPATSSLLVNLLENYLDNSAVRVVEGAIPETTALLEQKWDKILYTGSARVGRIVMAAAAKHLTPVILELGGKCPAVVDSDVNLQVTARRIIYGKWACNSGQACIGVDYVITRKEFAPTLINALKEELEQFFGKNPLESKDMSRIVSPTQFARLVKLLDENKVSDKIVLGGQRDEKKLKIAPTILLDVPEEAMVMQEEIFGPILPIITVENIEDSFGIIKSKPKPLAAYLFTNNEQLKKDYVEKISSGGMLVNDTILHVATRGLPFGGVEESGMGSYHGKFSFDSFSHKKSVLYRSFEADSSLRYPPYTPEKEKLLKALISGNIFRIIVTLLGWSKE* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2572 544 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 304 315 IPR016160 GO:0016491
Dod04g2572 544 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 78 497 IPR016162 GO:0016491
Dod04g2572 544 PIRSF ALDH 53 539 IPR012394 GO:0006081
Dod04g2572 544 Pfam Aldehyde dehydrogenase family 69 499 IPR015590 GO:0016491
Dod04g2572 544 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC 46 544 - -
Dod04g2572 544 SUPERFAMILY ALDH-like 73 515 IPR016161 GO:0016491
Dod04g2572 544 Coils Coil 96 116 - -
Dod04g2572 544 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 279 479 IPR016163 GO:0016620
Dod04g2572 544 PANTHER ALDEHYDE DEHYDROGENASE 46 544 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2572 Dod-Chr4 49617408 49621593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2572 46 544 Aldehyde Dehydrogenase Gene Family AT4G34240 69.940 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2572 K00128 - gmx:100800699 903.664