Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2570 ATGCAGAAGGCTGAATTGGAATTACCACCAGGGTTCAGGTTTCACCCCACTGATGATGAGCTGGTGAATCACTACTTGTGTAGAAAATGTGCCGCCCAGTCTATTGCTGCCCCTATCATCAAGGAGATCGATTTGTACAAGTTCGATCCATGGCAGCTTCCAGATATGGCTTCATACGGCGAGAAAGAGTGGTACTTCTTTTCTCCTCGGGACCGAAAATATCCGAACGGTTCACGGCCGAACCGGGCAGCAGGAACCGGTTACTGGAAGGCTACTGGAGCCGACAAGCCCATTGGAAAGCCGAAGCCCCTTGCCATCAAGAAGGCGCTGGTGTTCTACGCAGGCAAAGCCCCCAAAGGAGTCAAGACAAATTGGATCATGCACGAATATCGCCTCGCTAACGTTGACAGATCTGCTTCCAAGAAAAACAGCAACCTCAGGCTTGATGATTGGGTGTTGTGCCGAATTTACAACAAGAAAGGGAAGATTGAGAAATACAACAACGTAGGGGCGGTGGATCAGAAAGCATCGAAGATTTCAGAGGAGGTTCACCATGAATATGATGATCAAGAGAATATTGAGACCAAGCCGGAGATCAAGATGTATGGCCAGGATGGTTTCAGGAACAACGACCAATTGTACATGGACACGTCGGATTCAGTGCCCAGGTTGCACACCGACTCGAGCTGCTCGGAGCACGTGGTGTCGCCGGATGTCACGTGCGAGAAGGAGGTGCAGAGCGAGCCCAAGTGGAACGACCTTGAGCTGGGCCCGGACGCCTTTGATTTCCAGTTCAATTTCATGGACAGTAGTAACATCATGAACCTGACAGGAGATGACCCTTTTGCCCCTCAGGCCCAGTACCAAATAAACAACCCTTGGCAAGACATGTTTACGTACCTGCCTAAGTCATTTTGA 918 0.5011 MQKAELELPPGFRFHPTDDELVNHYLCRKCAAQSIAAPIIKEIDLYKFDPWQLPDMASYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKPLAIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSASKKNSNLRLDDWVLCRIYNKKGKIEKYNNVGAVDQKASKISEEVHHEYDDQENIETKPEIKMYGQDGFRNNDQLYMDTSDSVPRLHTDSSCSEHVVSPDVTCEKEVQSEPKWNDLELGPDAFDFQFNFMDSSNIMNLTGDDPFAPQAQYQINNPWQDMFTYLPKSF* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2570 305 Pfam No apical meristem (NAM) protein 9 132 IPR003441 GO:0003677|GO:0006355
Dod04g2570 305 ProSiteProfiles NAC domain profile. 8 159 IPR003441 GO:0003677|GO:0006355
Dod04g2570 305 PANTHER NAC TRANSCRIPTION FACTOR 56 1 284 - -
Dod04g2570 305 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 1 284 - -
Dod04g2570 305 Gene3D NAC domain 17 164 IPR036093 GO:0003677|GO:0006355
Dod04g2570 305 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2570 Dod-Chr4 49609055 49611089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2570 6 305 NAC Transcription Factor Family AT1G01720 60.912 1.41e-122 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod04g2570 NAM 5.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2570 - - gmx:100170751 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2570 04 49609055 49611089 Dod04g2570 04 49609055 49611089 ECH
Dod04g2570 04 49609055 49611089 Dod09g0821 09 26110325 26111622 ECH