Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2558 ATGAAGTTAACCGGCGACGACGACGACTGCGGCGGAGGAACCGGAGACGGAGGCGGTGGTCGGAAGGTCCTTGTAAGCGTGAAGTTGGATCCCCGGAGCCGGGAGTTGCTGACGTGGTCTCTGGTCAAAGTCGCCGAGCCCGGCGACATCGTCATTGCGCTTCACGCCATCGACAACATTACAGAGGATGCAGTGCTCTCTCTCGTGAAGGCATTTGATTCTGTTCTGGCGGTATACGAAGGCTTCTGCAACTTGAAGCAGGTTGATCTGAAGCTTAAAGTGTGTAGAGGTGCTTCTCCAAGGAAAGTGGCGGTGCAGGAAGCGAAATCTCTCGGCGTTGCTACGGTTATTGTTGGAACTTCTCGGAGCTTGCACGGAATCCGGTCTTCGGCGTCTGTTGCAAAATACTGTGCTAAGAAATTGCCTAAGTGTATATCTGTATTCGCAGTTGATAATGGCAAAGTTGCATTCCACAGAGGCCAAGTAAAACTAAATGAAAGCCTTGCATTGATAAACAAATCCTTGCCTGCTTGTAAAAAGAAAAGGCCGAAGAATTGTGAATGCTGTGCACCAGTGTTAGCATTGCCGGGGAGTTCTGCTTCTGCACCTGAACATAAGGAAGGGTTGACTGATAGTTATGAAAAGCAAAATTCACTGGCTTTGGTGCCAATTCAAAAGCTTGATGATGCTTCTAGTTATTCGAATGGGGTGGGTAAATCAGACCATTCAAAACCTGGTTGGTTGATCCTGCGCCGGGTGTTTCTGCCCAAAAAGCATAGGCAGAAATCTGAAGCTAACAATACACCTTCTGCTGTTGTCCATTGGGATCACATACAGAATATTGACCATAATGGTGATTCCAGCCTAGATGGGGAGAGTGGTGCCATTGTGCCATTTGGATCTGATGATATCATGACTCCTTACCCCCTTTATGGTGATTTGAGTTGCATTCCTGAAGCATTATTGGGCTTACAAGACAAGTACTCATCTTCTTGCAGACTGTATAGCTTCCAGGAGCTTGTGTCTGCAACTGCTAACTTCTCAAGTGAAAATTTGGTTGGAATAGGTGGTTGTAGTCGTGTTTACAGAGGATGTCTTGCAGATGGAAGGAAATTGGCCATCAAAATTTTCAAGTCATCTGAAGATGTGATAACAGAATTTGTTCAGGAAATTGAGGTCATCTCGACTTTGAATCACAAGAACATAATATCTCTATCTGGCTTTTGTATTGAGGGCAATAATTTACTACTGGTTTATGATCTTTTATCAAGGGGGAGCCTAGAAGAAAACCTTTATGGCAACAAGAATGACTGTAGTGCATTTGGTTGGCAAGAGAGATACAAGGTAGCTGTGGGGGTAGCTGAGGCATTGAACTATCTACATAATGCCGGGGAACATGCTGTGATCCACAGGGATGTGAAATCTTCTAATATCCTCCTTTCTGATGATTTTGAGCCTCAGCTATCGGATTTTGGACTGGCTAGTTGGGGTTCTTCTTCATCCCATAGTACTTGTACGGATGTAGCTGGAACTTTTGGATACCTAGCTCCTGAGTATTTTATGCATGGTAGAGTGACCGAGAAAGTTGATGTATATGCTTTTGGTGTTGTACTCCTTGAGCTTCTCTCAAGTAAGAAGCCAATTAACAATGAATGTCCCAAGGCTCAACAGAGCCTTGTTATGTGGGCAACACCAATTTTAAAGGATGGGAAGCTTTCTCAGTTGCTTGATCCAAGCCTAGGCAGTGATTACAACCATTGCCACATAGAAAGAATGGTCTTGGCTGCTACTCTCTGCATTAGACGATCATCTAGATTGCGACCTCATATCTGCCTTGTAAGTCTTCCTTGTTGA 1854 0.4482 MKLTGDDDDCGGGTGDGGGGRKVLVSVKLDPRSRELLTWSLVKVAEPGDIVIALHAIDNITEDAVLSLVKAFDSVLAVYEGFCNLKQVDLKLKVCRGASPRKVAVQEAKSLGVATVIVGTSRSLHGIRSSASVAKYCAKKLPKCISVFAVDNGKVAFHRGQVKLNESLALINKSLPACKKKRPKNCECCAPVLALPGSSASAPEHKEGLTDSYEKQNSLALVPIQKLDDASSYSNGVGKSDHSKPGWLILRRVFLPKKHRQKSEANNTPSAVVHWDHIQNIDHNGDSSLDGESGAIVPFGSDDIMTPYPLYGDLSCIPEALLGLQDKYSSSCRLYSFQELVSATANFSSENLVGIGGCSRVYRGCLADGRKLAIKIFKSSEDVITEFVQEIEVISTLNHKNIISLSGFCIEGNNLLLVYDLLSRGSLEENLYGNKNDCSAFGWQERYKVAVGVAEALNYLHNAGEHAVIHRDVKSSNILLSDDFEPQLSDFGLASWGSSSSHSTCTDVAGTFGYLAPEYFMHGRVTEKVDVYAFGVVLLELLSSKKPINNECPKAQQSLVMWATPILKDGKLSQLLDPSLGSDYNHCHIERMVLAATLCIRRSSRLRPHICLVSLPC* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2558 617 Pfam Universal stress protein family 21 143 IPR006016 -
Dod04g2558 617 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 142 - -
Dod04g2558 617 PANTHER OS01G0253100 PROTEIN 17 612 IPR045271 GO:0004714|GO:0006468
Dod04g2558 617 Pfam Protein kinase domain 349 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2558 617 Gene3D Transferase(Phosphotransferase) domain 1 422 615 - -
Dod04g2558 617 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 17 612 - -
Dod04g2558 617 Gene3D Phosphorylase Kinase; domain 1 323 421 - -
Dod04g2558 617 SMART serkin_6 347 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2558 617 Gene3D HUPs 20 151 IPR014729 -
Dod04g2558 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Dod04g2558 617 CDD USP_Like 22 145 - -
Dod04g2558 617 ProSiteProfiles Protein kinase domain profile. 347 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2558 617 SUPERFAMILY Protein kinase-like (PK-like) 328 610 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2558 Dod-Chr4 49480934 49483927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2558 334 613 Trihelix Transcription Factor Family AT1G68690 43.509 4.28e-70 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Dod04g2558 Pkinase 8.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2558 - - gmx:100815722 780.015