Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2545 ATGAGCACAGAACAGAAGGGAAGAGAACCAAATGAGTTTGAGAATAAGAAGAGAGTAGAAGAAACACAGAGAGAAAAAGAAGCACAGCAGCCTATCCAGATGAAGATACAAGGCTGTGAGGTTGAGGCCATTGGCATCAACTATACTATCCACACACACAAAACGGAGCCCCCATTTAAAATCTTCAGCAAATCTCCACAACTTGACACAGATGAAGATGCTGAAGAACCAGAAGTGGAAGCAAAAGCTGAGAAAAGATGCAGTGGAGTAAGGCATGTCCTCAAGAATGTGTCTTGCCGAGCCAAGTCATGGGAAATCCTTGCAATCGTTGGGCCAAGTGGAGCTGGAAAATCATCACTGCTTGAGATTCTTGCTGGTAAAGTTACTCCACAAAAAGGGTCATTGTTGGTAGACCACAAGCCCGTGGACAAAGCTCAGCTCAGGAAGCTTTCAGGTTATGTCACACAGAAGGACACTTTGTTTCCCTTACTTACAGTTGAAGAAACCATGATGTTCAGTGCAAAGCTGAGGCTAAGGCTTCCTCAGGAGCAACTCCACTGCAGGGTCAAGTCACTGATTAAGGAGCTTGGACTTGACCATGTTGCTGGGACTAGAATTGGTGATGAGAGGGTCCGAGGCATATCTGGTGGTGAGAGGCGCAGGGTTTCTATTGGTGTTGAAGTCATACATGATCCAAAAGTGCTGATTCTGGATGAACCAACCTCTGGTCTTGACAGCACTAATGCTTTGCAGATTATTGATATGCTTAAGGTTATGGCTGACACAAGGGGAAGAACTATAATCCTCAGTATCCATCAACCTGGGTTCAGAATAGTGAAGCTGTTAAATTCGTTGCTGTTGTTAGCCAATGGTTCTGTGTTACATCATGGCACTGCTGATTTGCTGGGTGTGAATCTAAGACTAATGGGTTTGGAGCTTCCCCTTCATGTCAATGTGGTTGAGTTTGCCATTGAGTCCATTGATAACATTCAGCAACAGCAGAAACACAAGGAGGTCCAGCTAGAAACGCCGCGGCGATTGCGGGGTACAGTGCAGCAGAAGAAAGGTGATGATGAGCCAGGTGAGTGTAGAAGTAGTAAGTTTACTCTACAACAGCTCTTTCAACAATCCAAGGTGATTGATGAAGAAATCATCAATGCTGGCATGGATTTCACTTGTGATTTTGCTAATTCTAGATTGAGAGAAACTGTGATTCTCACTCATAGGTTCTCCAAGAACATATTTCGTACAAAAGAGCTGTTTGCATGTAGGACTATTCAGATGCTGGTTTCTGGGCTTGTTTTGGGCTCCATCTTTTATAATCTCAAGGACGATCTAGAGGGAGCAGAAGAAAGGGTGGGTTTGTTTGCTTTCACATTAACATTTCTGTTATCAAGCAGCATAGAAGCTCTTCCAATTTTTCTGCAAGAAAGGGATATTCTGATGAAGGAGACATCTTGTGGAAGCTACCGTGTATCATCCTATGCTATTGCCAATGGCTTAGTCTACCTGCCATTTCTTCTCATCCTAGCCGTTTTGTTCTCTATACCCTTATACTGGCTTGTTGGGCTCAACCGGAATTTCATGGCTTTTCTACACTTTTTGTTGCTGATATGGTTGATTCTCTACACTGCCAACTCAGTTGTGGTGTGTTTCAGTGCTCTGGTGCCTAATTTCATTGTTGGGAATTCAGTGATTGCTGGTGTCATCGGGTCATTCTTCTTGTTCTCTGGATACTTCATTTCAAACAACGAAATCCCAAATTACTGGATTTTCATGCATTATATATCTCTGTTTAAGTATCCCTTTGAAGGGTTCCTAATAAATGAGTTCTCCAAGTCAGGGAAATGTTTGGAGTACATGTTTGGGGCATGCATGTTAAGGGGAGAGGATTTGCTCAAAGAAGAAGGTTATGGAGGGGAGAGTAGTAGATGGAAGAATGTTGGGGTCATGGTAGGGTTCATCTTGGTTTACAGGTTCATTTCTTATGTGATCCTTAGATACAGATGCTCGCAGAGGAGGTTCAGAAGTGTTGTCATCATCTGA 2046 0.4326 MSTEQKGREPNEFENKKRVEETQREKEAQQPIQMKIQGCEVEAIGINYTIHTHKTEPPFKIFSKSPQLDTDEDAEEPEVEAKAEKRCSGVRHVLKNVSCRAKSWEILAIVGPSGAGKSSLLEILAGKVTPQKGSLLVDHKPVDKAQLRKLSGYVTQKDTLFPLLTVEETMMFSAKLRLRLPQEQLHCRVKSLIKELGLDHVAGTRIGDERVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTNALQIIDMLKVMADTRGRTIILSIHQPGFRIVKLLNSLLLLANGSVLHHGTADLLGVNLRLMGLELPLHVNVVEFAIESIDNIQQQQKHKEVQLETPRRLRGTVQQKKGDDEPGECRSSKFTLQQLFQQSKVIDEEIINAGMDFTCDFANSRLRETVILTHRFSKNIFRTKELFACRTIQMLVSGLVLGSIFYNLKDDLEGAEERVGLFAFTLTFLLSSSIEALPIFLQERDILMKETSCGSYRVSSYAIANGLVYLPFLLILAVLFSIPLYWLVGLNRNFMAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSFFLFSGYFISNNEIPNYWIFMHYISLFKYPFEGFLINEFSKSGKCLEYMFGACMLRGEDLLKEEGYGGESSRWKNVGVMVGFILVYRFISYVILRYRCSQRRFRSVVII* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2545 681 ProSitePatterns ABC transporters family signature. 214 228 IPR017871 GO:0005524
Dod04g2545 681 Pfam ABC transporter 94 242 IPR003439 GO:0005524
Dod04g2545 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 34 669 - -
Dod04g2545 681 Pfam ABC-2 type transporter 403 611 IPR013525 GO:0016020|GO:0140359
Dod04g2545 681 Gene3D - 73 305 IPR027417 -
Dod04g2545 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 300 IPR027417 -
Dod04g2545 681 MobiDBLite consensus disorder prediction 1 33 - -
Dod04g2545 681 SMART AAA_5 103 432 IPR003593 -
Dod04g2545 681 MobiDBLite consensus disorder prediction 1 28 - -
Dod04g2545 681 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 79 315 IPR003439 GO:0005524
Dod04g2545 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 34 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2545 Dod-Chr4 49274986 49277031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2545 93 326 Calmodulin-binding Proteins AT2G36910 26.829 1.65e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2545 K05681 - gmx:100789722 1055.82