Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2541 ATGGGAGATCCAACGAACCAAACGGATGACATAGTGTGTTATGCACCAACTATGATAACAACAAATGGGATATGGCAAGGGGACAACCCTTTGAAGTATGCTCTCCCTCTCTTCATCTTGCAAATCACTTTAGTTGTCATTGCCACCCGCATTTTCGTCTTCATCCTCAAACCCATTCGCCAGCCACGCGTCATTGCTGAAATCTTGGGAGGAATAATATTGGGTCCTTCGGTGCTTGGGCGAAGCAAAACATTTGCTGAGGTGGTATTTCCTCTAAGAAGTGTGATCGTGATTGAAACAATGGCCAATGTTGGTCTCCTCTACTTTCTGTTCTTGGTAGGAGTGGGGATGGATGCTTCTGCACTGAGGCATTTAGGTAAAAAAGCGCTGTACATCGCAGTTGCTGGCATGGTCTTGCCCTTCCTAGTTGGAGCAGTCTTTTCTTTCGCTTTGATTGGAAATGAAAGGCCCATTAACAAAGGCGCTTTCATCCTCTTCCTTGGTGTTGTCCTTGCTGTCACTGCATTTCCTGTTCTTGCTAGGATTCTTGCTGAGCTCAAACTCACCAACACTGAGATGGGAAGAGTTGCTCTCTCATCTGCTCTCATCAATGATGTGTGTTCATGGATACTCTTGGCCGTGGCCGTTGCCATGGCCGAGAATGAAAAGCCTTCATTGGCTTCCCTTATGGTCCTTCTGTCAAGTGCAGCTTTTGTGGCCTTTTGTGCATTTGCAGTGAGGCCAGTGATCATGTGGATAATTAGGAAGACCCCAGAAGGTGAAACATTCAGTGATTTCTACATTTGTCTCATATTAGCTGGTGTCATGATCTCAGGCTTCATCACAGATGCTATTGGAACACATGCTGTTTTGGGGGCCTTTGTGTTTGGCTTGACAATCCCAAATGGACCACTTGGTCTTGCTCTTGTGGAAAAGCTTGAGGACTTCATTTCGGGTCTTCTTCTCCCACTATTCTTTGCCATCAGTGGGCTGAAGACTGATGTAGGTCTCATCAAAGGGGTCTCCACCTGGGCAGTTATATTTCTTCTTGTTGCTCTATCCTGCATTGGCAAAATTGTTGGTACCGTAGTTGTTGCAGTCTCTTATCAAATGTCACTTAGTGAAGGAGCAGCCCTTGGCTTGCTCATGAACTCAAAAGGCCTAATTGAGATGATTGTGATTAATGTTGGTAGGGACCAGAAGGTATTGGACGAGAGATCATTTGCAGTCATGGTTATTATAACTGTGCTAATGACTGGAGTAATTGTACCTGGCCTATCAGCTGTATACAAGCCATCAAGGAGGTTCTTATCATACAAAAGAAGAACCATTCAGATGTCAAAACGAGATGCAGAATTTAGAGTCCTAGTGTGTATACATACCCCTCGGAATGTGCCAACAATAATCAACCTCCTTGATGCTTCCAATCCAACAAAGAAGTCCCCAATATGCATCTATGTGCTCCATTTGGTGGAACTCACTGGCCGTACATCTGCCTTTCTCATTGTCCACAACACTAGGAAACCAGATCACCCTGCCCTTAATAGGACTCAAGCTCAATCTGACCACATAATCAATGCCTTTGAGAACTATGAGCAGCATGCTTCCTGTGTTTCTGTGCAGCCCTTGACAGCAATGTCCCCTTACTCCACCATGCATGAAGACATATGCAACCTGGCTGAGGACAAGCGTGTTGCCTTCATAGTCCTTCCTTTTCATAAACAGCAAACAGTTGATGGTGGGATGGAAGCAACGAACATGGCATTCCGCACTGTCAACCAGAATGTGCTAGCAAATTCACCTTGCTCAGTGGGGATTCTAGTAGATAGAGGCTTGAATGGCTCCAACCACATGGCTGCAGATCAAGTGTCTCATCATGTTGCAGTGCTGTTCTTTGGAGGGCCAGATGATAGAGAGGCATTGAGCTATGGGTGGAGGATGTCAGAACATCCAGGGATAAGCCTAACCATAATGCGATTTCTTCCTGGGGAAGAAGCTTCTGGCCATGGCACAGAGAGGCAACATAGCATCAACCCAGATGAACCAAGGGTACTAACTGTGGAAACAGATAGGGACACAGAAAAGCAACTAGATGAGAAGCTTCTACACTTGTTTAAGATGAGCCATGGCAATGATGAATCAATTGCTTACATTGAGAAAGTGGTTAACAATGGGGAGGAGACAGTGGCAGCAATAAGGTCAACAATGGACAACATTCATGACCTTTTCATAGTTGGGAGGGGCCAAGGAATGATATCACCACTCACTGCAGGGCTCACTGATTGGAGTGAGTGCCCAGAGTTAGGAGCAATTGGGGACTTGTTAGCATCTGCAGATTTTGCAGCAGCTGCTTCAGTTTTGGTGGTACAACAATATGTTGGGGAAGGGTCAGATGGAGATGGGTTGGCAACACCCGACAAAACAGTGCTGACAAATGAAGGATATATCAATCAGATAAGCCATCATTCAACACCACCAAGGGCACATACTGTTACTGTGTTCGATACAGAACGCTTATGA 2520 0.4552 MGDPTNQTDDIVCYAPTMITTNGIWQGDNPLKYALPLFILQITLVVIATRIFVFILKPIRQPRVIAEILGGIILGPSVLGRSKTFAEVVFPLRSVIVIETMANVGLLYFLFLVGVGMDASALRHLGKKALYIAVAGMVLPFLVGAVFSFALIGNERPINKGAFILFLGVVLAVTAFPVLARILAELKLTNTEMGRVALSSALINDVCSWILLAVAVAMAENEKPSLASLMVLLSSAAFVAFCAFAVRPVIMWIIRKTPEGETFSDFYICLILAGVMISGFITDAIGTHAVLGAFVFGLTIPNGPLGLALVEKLEDFISGLLLPLFFAISGLKTDVGLIKGVSTWAVIFLLVALSCIGKIVGTVVVAVSYQMSLSEGAALGLLMNSKGLIEMIVINVGRDQKVLDERSFAVMVIITVLMTGVIVPGLSAVYKPSRRFLSYKRRTIQMSKRDAEFRVLVCIHTPRNVPTIINLLDASNPTKKSPICIYVLHLVELTGRTSAFLIVHNTRKPDHPALNRTQAQSDHIINAFENYEQHASCVSVQPLTAMSPYSTMHEDICNLAEDKRVAFIVLPFHKQQTVDGGMEATNMAFRTVNQNVLANSPCSVGILVDRGLNGSNHMAADQVSHHVAVLFFGGPDDREALSYGWRMSEHPGISLTIMRFLPGEEASGHGTERQHSINPDEPRVLTVETDRDTEKQLDEKLLHLFKMSHGNDESIAYIEKVVNNGEETVAAIRSTMDNIHDLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASADFAAAASVLVVQQYVGEGSDGDGLATPDKTVLTNEGYINQISHHSTPPRAHTVTVFDTERL* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2541 839 Pfam Sodium/hydrogen exchanger family 44 425 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Dod04g2541 839 PANTHER CATION/H+ EXCHANGER 3 7 829 - -
Dod04g2541 839 Gene3D - 478 761 - -
Dod04g2541 839 PANTHER CATION/H + ANTIPORTER 7 829 - -
Dod04g2541 839 Gene3D - 37 436 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2541 Dod-Chr4 49250955 49254061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2541 11 813 Antiporter Super Family AT2G13620 68.369 0.0 1112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2541 - - adu:107480185 1256.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2541 04 49250955 49254061 Dod04g2541 04 49250955 49254061 ECH