Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2531 ATGTCTAAACAAAATTTGGTTCCGGGGTTTAGGTTCCATCCCACTGACGTAGAACTGGTAAAGTACTTCTTGAAAAGGAAAGTGATGGGCAAAAAATTCTCTTTTGAAGTCATAAGTGAACTTGACATATATCAGTACTCTCCATGGGATCTCCCAGATAAGTCGTGTCTGAGAAGTGGGGATTTGGAGTGGTACTTCTTCAGCCCAAGAGGGAAGAAATATGGCAGGGGGTCAAGGACTAATCGTGCCACAAACAACGGGTATTGGAAAGCTACTGGGAAGGACAGAGCTGTTGAACATAATAAGCAAACTGTGGGCCTGATCAAAACCCTTGTCTTTCACATTGGTAAAGCCCCTGATGGGGACCGAACTGATTGGGTTATGCATGAGTATAGGCTTGAAGATAAGGAACTCACTAACAAAGGAATTCCTCAGGATTCCTTTGTGATCTGTAAGGTATTCCAGAAGCAGGGTCTTGGCCCCAGGAATGGTGCACAATATGGGAGACCATTTAATGAGCGAGACTGGGATGATGATGATGATGATGATGATGTACAAGAGGAAATCCCTCCAGCTGCTTTGTCTGCACCAGTTCCCGTTCTGGATATGACATCTAATAATAGTTCTCCTGAAAATGAGCAGCATCTCGCTGCTACTGCTAGTGGATGTGTTGGGCCAACATCTATGTTGTCATGTCTGTCAGGGCCTGTGCCTTCTCCTGACCCCGCAAATCCTTCAGATCCAACAAGCAACCAAGCTGTTAACAATGATGATAATATTTTAACATTGCTTGATCTTTCCAAAGAAGACAGCAAATTGCCTGAGGAAAATATTGCTGAAGGTACACCTTCAAGTGAGTTTTTTGAGGGCTTGGGAGACCTTAACAACTGGGCTGCATTGAGTGGTTTCTTCTCTGGTCAGAATGCTGAATATAGCCCACATGAAATGGTTACTTCGGGTGACTTGGATTACTTGGATTACGTGGAGTTGATTGATCTGGACCCTCCCTTTGATTGA 1017 0.4415 MSKQNLVPGFRFHPTDVELVKYFLKRKVMGKKFSFEVISELDIYQYSPWDLPDKSCLRSGDLEWYFFSPRGKKYGRGSRTNRATNNGYWKATGKDRAVEHNKQTVGLIKTLVFHIGKAPDGDRTDWVMHEYRLEDKELTNKGIPQDSFVICKVFQKQGLGPRNGAQYGRPFNERDWDDDDDDDDVQEEIPPAALSAPVPVLDMTSNNSSPENEQHLAATASGCVGPTSMLSCLSGPVPSPDPANPSDPTSNQAVNNDDNILTLLDLSKEDSKLPEENIAEGTPSSEFFEGLGDLNNWAALSGFFSGQNAEYSPHEMVTSGDLDYLDYVELIDLDPPFD* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2531 338 MobiDBLite consensus disorder prediction 232 256 - -
Dod04g2531 338 PANTHER PLANT NAC DOMAIN PROTEIN 250 330 - -
Dod04g2531 338 SUPERFAMILY NAC domain 3 156 IPR036093 GO:0003677|GO:0006355
Dod04g2531 338 PANTHER PLANT NAC DOMAIN PROTEIN 1 244 - -
Dod04g2531 338 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Dod04g2531 338 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Dod04g2531 338 MobiDBLite consensus disorder prediction 200 214 - -
Dod04g2531 338 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 244 - -
Dod04g2531 338 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Dod04g2531 338 MobiDBLite consensus disorder prediction 161 214 - -
Dod04g2531 338 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 250 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2531 Dod-Chr4 49152495 49155203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2531 1 234 NAC Transcription Factor Family AT5G64060 54.583 3.52e-89 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod04g2531 NAM 1.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2531 - - adu:107470479 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2531 04 49152495 49155203 Dod04g2531 04 49152495 49155203 ECH
Dod04g2531 04 49152495 49155203 Dod09g1815 09 39786128 39789997 PCT