Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2514 ATGAGTTTGGCGGGTACAGAAAGCTCAGAAGAGGGTGCAGCGCATCCAGAACCTCCTGATCCTGATGTTCTTGAAGTTGATCCTACTTCTCGCTACATTAGGTATAAAGAAGTGGTCGGCAAGGGAGCTTTCAAAACCGTTTACAAGGCATTTGATGAAGTAAATGGAATTGAAGTTGCATGGGGCCAGGTTCAGATTGATGAGGTGCTACAGTCACCAGGTGACTTAGAGAGGCTGTACTCGGAAGTGCATCTCCTGAGATCACTGAAACACACTAACATAGTAAGATTCTACAATTCCTGGATTGATGAGAAGCGCAAGACTGTTAACATAATTACAGAGTTGTTTACCTCCGGTAGCCTCAAACAGTATCGTAAAAAACACAAGAAGGTTGACATGAAGGCTGTTAAAGGATGGGCAAGACAGATTTTAATGGGTTTAAGCTACCTCCACAGTCACAACCCACCAATTATACATAGGGACCTGAAGTGTGATAATATATTTATCAATGGTCATCAGGGAGAAGTTAAAATTGGAGATCTGGGGCTGGCGACTTTCTTGGAGCGGGCTAATGCCAAGAGTGTTATCGGAACCCCGGAGTTTATGGCACCTGAGCTTTATGATGAAAATTACAATGAATTAGCAGACATATATTCATTTGGTATGTGCATGCTTGAGTTGGTGACTTCTGAGTATCCTTATAGTGAATGCAGAAACTCAGCTCAGATATACAAGAAAGTTTCATCTGGTATAAAGCCTGTTGCTCTTTCTAAACTCAAAGATCCAGAAATAAAATCATTTATTGAAAAATGTCTTGTCCCAGCATCTCAAAGATTGTCAGCAAAGGAGCTTTTGATGGATCCTTTTCTTGAAACTAATGGTTCAACAAGGAATCATCCTTTTCCATTACCAGATATTGTTCTTCCCAAATTGGGAGCCTTTGAAAGCCGATGTCTGATGTCAGAAGGTCCTGCTAGTGCACGCAATGGGAACATTTCCATGGATATTGGTGGCACCGGTGAGCTCCCTGTTATCACGGTTTTTGATAATCCTACTGATGATGCATCATCTCATCCTCCATGTGTTGAGATAAGAAGGTCGAAGAGAGGTGATCTATTCTCTCTAAAAGGCCAAGAAAATGATGAGAATTCTGTATCATTAGTTCTCCGGATAGCTGATCAGAGTGGGCGGGCAAGAAATATCCATTTCATATTCTACCTTGACACTGATACTGCTGTCTCGGTTTCAAGTGAAATGGTTGAGCAACTTGAACTTCCCGATCACAATGTCCTTTTCATAGCTGAGTTGATAGATTTGTTGTTGATGAAGTTGATTCCTGATTGGAAACCTTGTGTTGTAATTGATCATTTGGTTTCTCCAAATGGTAAATGGAGTCATGTAAGCCAGCAGAGAGTCCGGGAGTTGGTGAAATGCAAAGAAAGCTCAGCACCTTCCAGCCAAATTGTGCCTGAAGTAGTAGGTCCCTCAACCTCACCGGGAAGGTCAGCCACAAAAGAAAACCATGATAATATGGATTTCGATGAGGTTTTATCGAGAGAGAGCGTTAGTATCCAAAGAGCAACCACGACAGATGATAAATTGTCTGAGGTGTCCTATGCTTCTGCAACAACAGACTTTGATAATAAGCTTTCTGTAGTTTCGTTTATGTCTGCTGAATCAGGACTTGCAGACTTAACTATTGCGAATAGAGGGAGTCAATCTTCATTCGCACTTCCATCCGAAATTGGGACATCTCTTGATCATGGGAGCAAGTTTTCAGAAATGGGAAGCAACGGTATGATGATGAGCGCCTCTACTCATCCTATCAGTGTTTCCTCCTTGTCTGAACGTGAGAATGAATTGAGAATGGAGTTAGCAATGATTGAACAGAAATATCAAGAGGCAATTAAAGATTTATCCAGAAGAAGATACCAGGCAGTCATGCAGATTAGAAGAAGAATGTCGGAGAAGATGCTATTATCATCATCATAG 1992 0.4152 MSLAGTESSEEGAAHPEPPDPDVLEVDPTSRYIRYKEVVGKGAFKTVYKAFDEVNGIEVAWGQVQIDEVLQSPGDLERLYSEVHLLRSLKHTNIVRFYNSWIDEKRKTVNIITELFTSGSLKQYRKKHKKVDMKAVKGWARQILMGLSYLHSHNPPIIHRDLKCDNIFINGHQGEVKIGDLGLATFLERANAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLELVTSEYPYSECRNSAQIYKKVSSGIKPVALSKLKDPEIKSFIEKCLVPASQRLSAKELLMDPFLETNGSTRNHPFPLPDIVLPKLGAFESRCLMSEGPASARNGNISMDIGGTGELPVITVFDNPTDDASSHPPCVEIRRSKRGDLFSLKGQENDENSVSLVLRIADQSGRARNIHFIFYLDTDTAVSVSSEMVEQLELPDHNVLFIAELIDLLLMKLIPDWKPCVVIDHLVSPNGKWSHVSQQRVRELVKCKESSAPSSQIVPEVVGPSTSPGRSATKENHDNMDFDEVLSRESVSIQRATTTDDKLSEVSYASATTDFDNKLSVVSFMSAESGLADLTIANRGSQSSFALPSEIGTSLDHGSKFSEMGSNGMMMSASTHPISVSSLSERENELRMELAMIEQKYQEAIKDLSRRRYQAVMQIRRRMSEKMLLSSS* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2514 663 Coils Coil 611 638 - -
Dod04g2514 663 CDD STKc_WNK 31 290 - -
Dod04g2514 663 Gene3D Transferase(Phosphotransferase) domain 1 116 298 - -
Dod04g2514 663 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2514 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Dod04g2514 663 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Dod04g2514 663 SUPERFAMILY Protein kinase-like (PK-like) 34 325 IPR011009 -
Dod04g2514 663 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 4 658 - -
Dod04g2514 663 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2514 663 MobiDBLite consensus disorder prediction 486 512 - -
Dod04g2514 663 Pfam Protein kinase domain 36 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g2514 663 MobiDBLite consensus disorder prediction 1 26 - -
Dod04g2514 663 Gene3D - 383 449 - -
Dod04g2514 663 MobiDBLite consensus disorder prediction 486 504 - -
Dod04g2514 663 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g2514 Dod-Chr4 48956053 48959144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g2514 133 465 MAP Kinase Kinase Kinase AT1G49160 69.970 3.82e-173 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Dod04g2514 Pkinase 7.2e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2514 K08867 - gmx:121175054 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2514 04 48956053 48959144 Dod04g2514 04 48956053 48959144 ECH
Dod04g2514 04 48956053 48959144 Dod09g1791 09 39510633 39512164 PCT