Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g2513 ATGGAGTTCCTCGACGAAGACACGAGGCCAAGGTTCCTCTTCCAGTCGGGATCACAACCCGCACCTTCGCCCACCGATTCCCAATCTTACAACAAACCAACCAAGCCACTCCTCGCCCTTACCCTCTCTATCGCCACCATCCTCTTCGCTCTCTCCATCTTCTTCCTCCAATCCGAGCCCTTCAAATCCATTATCCTCTGGCTCTCCTTCTCCCTCCTCATCGGCCCCTTCGCCCCTCCCTCCCTCACCGCTGGCGACCCCCGCGTCGGCCAAGGCCCCATCCTCCACTTCGAAGAACCACAACCCGCCGCCGACACAGACGACGCCGCCGTCAATAGGAAGAACTCGCAGCGGCGATCCAAACCGCGCAGATCTGACGATGTCGCCGCCGCCGCCGTCGTCGTTTCTCCGGTCATCAGCGCGCCGGATCGGGAACCTGATAAGATGCGAGGCGAAGAGAACAGAAACGGAAGAAACGGCGTTGCATCGGTGGAGGAGGATGAGAAGGAGTGGAGCGAAGAGGACGTTGAGGTTCTGAAGAAGCAGATGGCGAAGCATCCCGTGGGGAAGCCAGGGAGGTGGGAGGCGATAGCGGCGGCGTTCGGAGGGAGGCGAACTGCGGAGAGCGTGATTAAGAAGGCGAAGGAGATGGCGGAGAAGAAGGTGGACGATTCGGAGTCGTACGCGCAGTTTTTGAAGAAGAGGAAGCCGGTGGATAAGAGAGTGGCTGAGATGGAGAGCAATGTGGATGAGAGCGCGTGGAGTTCAGGCGAGGACATCGCGCTGCTGAATGCTCTGAAGGCGTTTCCGAAGGACGTTCCGATGAGGTGGGAGAAGGTTGCGGCTGCGGTGCCTGGGAAGTCCAAGGCCGCTTGCATGAAGAGGGTTTCTGTGTTGAAGAAGGACTTTCGGAGTTCTAAAGCTTCTGCCGCAGCAGATAATAGGGTTGACTGA 954 0.586 MEFLDEDTRPRFLFQSGSQPAPSPTDSQSYNKPTKPLLALTLSIATILFALSIFFLQSEPFKSIILWLSFSLLIGPFAPPSLTAGDPRVGQGPILHFEEPQPAADTDDAAVNRKNSQRRSKPRRSDDVAAAAVVVSPVISAPDREPDKMRGEENRNGRNGVASVEEDEKEWSEEDVEVLKKQMAKHPVGKPGRWEAIAAAFGGRRTAESVIKKAKEMAEKKVDDSESYAQFLKKRKPVDKRVAEMESNVDESAWSSGEDIALLNALKAFPKDVPMRWEKVAAAVPGKSKAACMKRVSVLKKDFRSSKASAAADNRVD* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g2513 317 Gene3D - 163 224 - -
Dod04g2513 317 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 310 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Dod04g2513 317 MobiDBLite consensus disorder prediction 143 166 - -
Dod04g2513 317 SMART sant 250 302 IPR001005 -
Dod04g2513 317 SMART sant 167 220 IPR001005 -
Dod04g2513 317 CDD SANT 253 295 IPR001005 -
Dod04g2513 317 Gene3D - 246 311 - -
Dod04g2513 317 ProSiteProfiles Myb-like domain profile. 246 295 IPR001005 -
Dod04g2513 317 ProSiteProfiles Myb-like domain profile. 163 218 IPR001005 -
Dod04g2513 317 MobiDBLite consensus disorder prediction 12 31 - -
Dod04g2513 317 SUPERFAMILY Homeodomain-like 250 302 IPR009057 -
Dod04g2513 317 MobiDBLite consensus disorder prediction 141 171 - -
Dod04g2513 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 171 222 IPR017930 -
Dod04g2513 317 MobiDBLite consensus disorder prediction 1 31 - -
Dod04g2513 317 PANTHER TRANSCRIPTION FACTOR MAMYB 1 310 - -
Dod04g2513 317 MobiDBLite consensus disorder prediction 84 129 - -
Dod04g2513 317 MobiDBLite consensus disorder prediction 111 126 - -
Dod04g2513 317 SUPERFAMILY Homeodomain-like 169 221 IPR009057 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod04g2513 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g2513 - - adu:107480279 411.379